Pairwise Alignments

Query, 353 a.a., Holliday junction DNA helicase RuvB from Pseudomonas fluorescens FW300-N1B4

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  422 bits (1085), Expect = e-123
 Identities = 210/334 (62%), Positives = 262/334 (78%), Gaps = 4/334 (1%)

Query: 3   EADRLIAATGGPRDREEVQDRAIRPVSLAEYIGQPTVREQMELFIQAARGRNESLDHTLI 62
           E +RLI+     R RE   D A+RP SLA+++GQ   RE + +F+QAAR R E++DH L 
Sbjct: 7   EDERLISG----RRREGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLF 62

Query: 63  FGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSP 122
            GPPGLGKTTLA I+A+E+GV  + TSGP++ + GDLAA+LTNLEP DVLFIDEIHRL+P
Sbjct: 63  HGPPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNP 122

Query: 123 IVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR 182
            +EEVLYPAMEDFQLD++IGEGPAARS+++DLPPFTLVGATTR+G+LT PLRDRFGI  R
Sbjct: 123 AIEEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLR 182

Query: 183 LEFYNTADLATIVSRSANILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKG 242
           L+FY T +L  IV+R + +LG+ L  EGA E+ARR+RGTPR+A RLLRRVRDFA V  + 
Sbjct: 183 LDFYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRS 242

Query: 243 HITKPIADLALNLLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDV 302
            +   IAD ALN L+VD RG D  DRR L  M + + GGPVGVD+LAAA++EER T+EDV
Sbjct: 243 PVDAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDV 302

Query: 303 LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPS 336
           +EPYLIQQG+I RTPRGR++T  A+ H GL  P+
Sbjct: 303 IEPYLIQQGFIKRTPRGRMLTAIAWTHLGLTPPA 336