Pairwise Alignments

Query, 353 a.a., Holliday junction DNA helicase RuvB from Pseudomonas fluorescens FW300-N1B4

Subject, 343 a.a., Holliday junction DNA helicase ruvB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  376 bits (966), Expect = e-109
 Identities = 188/320 (58%), Positives = 245/320 (76%)

Query: 17  REEVQDRAIRPVSLAEYIGQPTVREQMELFIQAARGRNESLDHTLIFGPPGLGKTTLANI 76
           RE   + A+RP+S  ++ GQ  V E + +F++AAR R E+LDH L+ GPPGLGKTTL+NI
Sbjct: 16  RERDFENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVLLHGPPGLGKTTLSNI 75

Query: 77  IAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEEVLYPAMEDFQ 136
           IA E+GV  K TSGPVL++PGDLA +LT+LEP+DVLFIDEIHRLSP+VEE LY AMED++
Sbjct: 76  IANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLSPVVEEYLYSAMEDYR 135

Query: 137 LDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNTADLATIVS 196
           +DIMI +GP+ARSI++DL PFTLVGATTR+G+LT PLR RFGI   LE+Y+   L+ I+ 
Sbjct: 136 IDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINLHLEYYDDDILSNIIR 195

Query: 197 RSANILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITKPIADLALNLL 256
           RSA+IL +P     A EIA R+RGTPRIAN LLRRVRDFA+V+  G I   IA  AL  L
Sbjct: 196 RSASILDVPCSVRAASEIASRSRGTPRIANALLRRVRDFAQVKGSGSIDTEIAQFALEAL 255

Query: 257 DVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRT 316
           ++D+ G D  D ++L T+I+KF GGPVG+ ++A A+ E+  TIE+V EP+LI++G++ RT
Sbjct: 256 NIDKYGLDEIDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEEVYEPFLIKEGFMKRT 315

Query: 317 PRGRVVTRHAYLHFGLNIPS 336
           PRGR VT  AY H G ++ S
Sbjct: 316 PRGREVTELAYKHLGRSLYS 335