Pairwise Alignments

Query, 243 a.a., DNA-binding response regulator GltR, controls specific porins for the entry of glucose from Pseudomonas fluorescens FW300-N1B4

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (473), Expect = 3e-52
 Identities = 103/241 (42%), Positives = 149/241 (61%), Gaps = 8/241 (3%)

Query: 5   NKSILLVDDDQEIRELLDTYLTRAGFQVRTTPDGAGFRQALNEAPSDLVILDVMLPDEDG 64
           N  +L+VDDD  +R LL+ YL+  GFQVR+  +G    + L      L++LD+MLP EDG
Sbjct: 4   NHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDG 63

Query: 65  FSLCRWIRQHPRQAHVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLR 124
            S+CR +R       +PI+MLTA  DE DR++GLE+GADDYL KPF+PREL ARIKA+LR
Sbjct: 64  LSICRRLRNSNNM--IPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLR 121

Query: 125 RAQF---GQERSGSEVLAFDDWRLDMVSHRLFHIDGEEVI-LSGADFALLKLFLDHPQEI 180
           R      G   +   ++ F ++RL++ +  +F   GEE + L+  +FA+LK  + + +E 
Sbjct: 122 RQVIEAPGAPSAEETIIEFGEFRLNLGTREMFR--GEEAMPLTSGEFAVLKALVTNAREP 179

Query: 181 LDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAANVVAG 240
           L RD + N  RGR+   ++R +D+ +SRLR+ L      PR I+TV G GY    +  A 
Sbjct: 180 LSRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGKAA 239

Query: 241 N 241
           N
Sbjct: 240 N 240