Pairwise Alignments

Query, 452 a.a., FIG002188: hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 454 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  319 bits (818), Expect = 1e-91
 Identities = 185/455 (40%), Positives = 260/455 (57%), Gaps = 4/455 (0%)

Query: 1   MKYAKTVLAASLALVLAAQAQAAVSTQDAAKLGSSLTLIGAEKAANADGSIPAYEGGLTT 60
           MK    + AA +  + A  A A VS  +AAKLG+ LT +G EKA NADGSIPA++GG+T 
Sbjct: 1   MKKLTLLSAAVIVALTAPTAFAKVSEAEAAKLGTELTPLGGEKAGNADGSIPAWDGGITK 60

Query: 61  PPASFKSGDSMRPDPFVNEKPLLVIDGKNVDQYKGLLSATTVELAKRFP-SFHVNVYPTH 119
           P A ++ G    PDPF  +K    I   N  QYK  L+   ++L   +P +F +NVY T 
Sbjct: 61  PVAGYEKG-MHHPDPFPGDKIEFTITNANKAQYKDNLTEGQLKLFDLYPDTFKMNVYQTR 119

Query: 120 RTVSLPKAVLDNGVKNATGAKSLEGGLAIDNVLPGVPFPIPQSGNEAMWNFLLRYQGVNI 179
           RT S+P+ V D    NA+ A+ +  G  I     GVPFPIPQ+G EA+WN +LR++GV++
Sbjct: 120 RTASVPQFVYDATKANASRAELVADGNGISGASIGVPFPIPQNGLEAIWNHVLRFRGVDV 179

Query: 180 NSKYDSWNVDSAGVPSLATTGLAF-ISYPIYENLAQPISSADVYYQMKLSYTGPARRAGE 238
            +        ++G  +L  T       Y   E     +  ++  +  K   T PAR AG 
Sbjct: 180 ETARSQAAPTASGSYTLVETAEEIRFEYSRPEMTLDKLKESNTLFYFKQVVTQPARLAGT 239

Query: 239 AVMLKDAANPLQQPRRAWQYLPGQRRVKLAPNLAYDTPNPGTAGAGTYDDVFVFNGALDR 298
           A+++K+  +    PR+AW Y  GQRRV+ APN+A+DTP   + G  T DD  +FNG+  R
Sbjct: 240 ALLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVR 299

Query: 299 YDWKLVGKQEMIVPYNTYKL-TYAQDPKSLTTANHLAPDYVRWEKHRVWVVEGNLKSGAR 357
           Y+W+L+GK+E+ +PYN YKL +     + +    H+ PDYVRWEKHRVWVV+  LK G R
Sbjct: 300 YNWELLGKKEIYIPYNDYKLHSDKLKYEQILKPGHINPDYVRWEKHRVWVVKAQLKEGMR 359

Query: 358 HIYQKRRFYLDEDSWTALASDQYDARGQLYRGSFAFLSQSYDKQIPDSTPFMIYDLVGGS 417
           HIY+ R FYLDEDSW    +D YD R +LYR + A     Y+     +T  +I+DL    
Sbjct: 360 HIYKTRVFYLDEDSWQVSMADMYDNRDELYRVAVAHAINYYEVPTHWTTLEVIHDLQSRR 419

Query: 418 YNINGVVGPYGGIKYIDPLSKAQWSPESLAGNGIR 452
           Y   G+        +   LS+A ++P +L   GIR
Sbjct: 420 YLAMGLDNEGRMYNFDAKLSEANFTPAALRRAGIR 454