Pairwise Alignments

Query, 168 a.a., Transcriptional activator RfaH from Pseudomonas fluorescens FW300-N1B4

Subject, 177 a.a., transcription termination/antitermination factor NusG from Pseudomonas stutzeri RCH2

 Score = 53.9 bits (128), Expect = 1e-12
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%)

Query: 49  GQRRVISESLFPGYLFIQLSLQDSWGPLRSTRGVSRVVGFGG----QPLPIRD----ALI 100
           GQ+R      FPGY+ +Q+ + +  G     +   RV+GF G    +P PI D    A++
Sbjct: 51  GQKRKSERKFFPGYVLVQMEMNE--GTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAIL 108

Query: 101 DELQERDSQAIVTTLLRHGDTVRITEGPFSDLEAVFLAMDGEE-RVLLMMNFLQREQHIS 159
             + +   +    TL   G+ VR+ +GPF+D   V   ++ E+ R+ + +    R   + 
Sbjct: 109 RRVADGSDKPKPKTLFEPGEVVRVADGPFADFNGVVEEVNYEKSRIQVAVLIFGRSTPVE 168

Query: 160 LPLAGVNKI 168
           L  + V K+
Sbjct: 169 LEFSQVEKV 177