Pairwise Alignments

Query, 168 a.a., Transcriptional activator RfaH from Pseudomonas fluorescens FW300-N1B4

Subject, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 4e-28
 Identities = 53/156 (33%), Positives = 92/156 (58%), Gaps = 5/156 (3%)

Query: 10  KAWYLLQCKPKQDERAEEHLQRQGYACFRSTYRRERVLRGQRRVISESLFPGYLFIQLSL 69
           K WYLL CK  + +RA+ HL+ Q   CF      E++LRG+R+++ E LFP Y+F++   
Sbjct: 2   KRWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFDF 61

Query: 70  QD--SWGPLRSTRGVSRVVGFGGQPLPIRDALIDELQERDSQAI---VTTLLRHGDTVRI 124
           ++  S+  +RSTRGV   V  G  P  ++  LI +L++ D + +      L   G TVR+
Sbjct: 62  ENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPEKGQTVRV 121

Query: 125 TEGPFSDLEAVFLAMDGEERVLLMMNFLQREQHISL 160
             G F+ +EA++L  DG+ R ++++  + ++  +S+
Sbjct: 122 ARGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSI 157