Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (362), Expect = 3e-39
 Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 5   DLRRVDMNLLVIFEALMFEKNLTRVAEKLFMGQPAVSAALGRLRDLFDDPLLLRNGRGME 64
           +LR +D+NLL I E L+  K++++ A+ L M QPAVS AL RLR+ F DPLL++      
Sbjct: 7   NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYR 66

Query: 65  PTARALAILKELQPAMDTISGAVSRAKEFDPASSCDVFRIGLSDDAEFGLFPPLLRKLQE 124
            TA+   +  EL+  ++TI   +   K FDP     VF IG  D     + P LL + Q+
Sbjct: 67  LTAKGERLCSELERTLNTIRHMLVDDK-FDPMHYSGVFTIGALDFEMMMIVPKLLARFQQ 125

Query: 125 EAPGIVVVVRRANYLLMPALLASGEISVGVSYTTD-LPANAKRKRLRDIPCKVLRGDNRP 183
            AP + + +   N   MP      +++  + Y+TD  P N  ++RL +    V+   N P
Sbjct: 126 RAPNLKLQIVPYN-AYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184

Query: 184 ---GPLTLDEYCARPHAMVSFSGDLSGNIDMDLAKVGRSRRVVLGVPQFSGLRALLAGTE 240
               P+TL+ YC   H ++S +G    ++D +L K+   R VV  +P FS +  LL  T+
Sbjct: 185 LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244

Query: 241 MIATVPDYAACALVEGCTLRAEDPPFPIDAAQLSMAWSGVHDNDPAEKWLRSRISQFMSE 300
           +IAT+P      L +   +   D PF     ++   W  +H + P  +W+R  I   + E
Sbjct: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLVYE 304

Query: 301 PL 302
            +
Sbjct: 305 EI 306