Pairwise Alignments

Query, 341 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N1B4

Subject, 562 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  419 bits (1077), Expect = e-122
 Identities = 210/336 (62%), Positives = 252/336 (75%), Gaps = 9/336 (2%)

Query: 1   MLTHRNLVANMLQCKALMGSN-------LNEGCEILITPLPLYHIYAFTFHCMAMMLIGN 53
           MLTH NLVANM Q +A M          + EG E++I PLPLYHIYAFT +CM M++ GN
Sbjct: 226 MLTHGNLVANMQQVRANMQQLDEHGHPIIREGQEVMIAPLPLYHIYAFTVNCMCMVVTGN 285

Query: 54  HNILISNPRDLTAMVKELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSSLKITLSGGMAL 113
           HN+LI+NPRD+   VKEL +W+FS F+GLNTLFVAL  +  F+K+DFS LK T SGG AL
Sbjct: 286 HNVLITNPRDINGFVKELQRWQFSAFLGLNTLFVALMAHPQFKKIDFSRLKGTNSGGTAL 345

Query: 114 QLAAAERWKEVAGCPICEGYGMTETSPVATVNP-SQNIQIGTIGIPVPSTLCKVIDDAGV 172
             A AERWK + GC + EGYG+TETSPV   NP  ++ ++GT+G+PVP T  KVIDD G 
Sbjct: 346 VSAVAERWKSMTGCTVVEGYGLTETSPVVCANPHGEHSRLGTVGLPVPGTTVKVIDDEGN 405

Query: 173 EQPLGAIGELCVKGPQVMKGYWQRQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKD 232
             PLG  GELCVKGPQVMKGYWQR DAT E+LD EGWLKTGDIA+I  DG++ IVDRKKD
Sbjct: 406 ALPLGERGELCVKGPQVMKGYWQRPDATAEVLDEEGWLKTGDIAVIDEDGFVSIVDRKKD 465

Query: 233 MILVSGFNVYPNELEDVLATLPGVLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKDQVME 292
           +I+VSGFNVYPNE+EDV+   P V  CAAIGV DEKSGEA+K+F+V     TL +D++  
Sbjct: 466 LIIVSGFNVYPNEIEDVVMAHPKVAACAAIGVADEKSGEAVKLFVVPS-DPTLDQDELHA 524

Query: 293 HMRANVTGYKVPKAVEFRDALPTTNVGKILRRELRD 328
           + R N TGYK+P+   FRDALP T VGKILRRELRD
Sbjct: 525 YCRENFTGYKMPRHYVFRDALPMTPVGKILRRELRD 560



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 291 MEHMRANVTGYKVPKAVEFRDAL 313
           ++H++  V  Y +P+A+ F+D L
Sbjct: 169 VKHLKKMVPDYSLPQAISFKDVL 191