Pairwise Alignments

Query, 341 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N1B4

Subject, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  350 bits (898), Expect = e-101
 Identities = 180/330 (54%), Positives = 232/330 (70%), Gaps = 4/330 (1%)

Query: 1   MLTHRNLVANMLQCKALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISN 60
           ML+H NL+ANMLQ ++ + S   EG EI I PLP+YHIYAF  + +     G  ++LI N
Sbjct: 202 MLSHSNLLANMLQVQSRLASKFVEGEEIFIAPLPIYHIYAFMVNFVYFEQ-GGCSVLIPN 260

Query: 61  PRDLTAMVKELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSSLKITLSGGMALQLAAAER 120
           PRD++A+++ +S+  F+GF GLNTLFV LC+ ++F+ LDFS LKIT+SGG AL  AAA  
Sbjct: 261 PRDISALIQTMSQHPFTGFAGLNTLFVGLCHQQSFQALDFSHLKITISGGTALTQAAASI 320

Query: 121 WKEVAGCPICEGYGMTETSPVATVNPSQNIQIGTIGIPVPSTLCKVIDDAGVEQPLGAIG 180
           W+   GC I EGYG++ETSPV ++N      +GTIG PV  T  K++D +  E P G IG
Sbjct: 321 WQSTTGCTISEGYGLSETSPVVSLNAPGLECLGTIGRPVIDTQVKILDASEQEVPQGEIG 380

Query: 181 ELCVKGPQVMKGYWQRQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFN 240
           EL VKGPQVM GYWQ+ + T +++ S+G+ KTGDIAL   DG  +IVDRKKDMI+VSGFN
Sbjct: 381 ELAVKGPQVMSGYWQKPEETAKVMTSDGFFKTGDIALATEDGMHKIVDRKKDMIIVSGFN 440

Query: 241 VYPNELEDVLATLPGVLQCAAIGVPDEKSGEAIKIFIVAKP---GVTLTKDQVMEHMRAN 297
           VYPNE+EDVLA    VL+CA IGV D +SGEA+K  IV +        TK  ++EH RA 
Sbjct: 441 VYPNEVEDVLAAHESVLECAVIGVDDSRSGEAVKAAIVLREPELANDATKQALLEHCRAQ 500

Query: 298 VTGYKVPKAVEFRDALPTTNVGKILRRELR 327
           +  YK+PK +EF  ALP + VGKILRRELR
Sbjct: 501 LAAYKLPKIIEFMPALPKSTVGKILRRELR 530