Pairwise Alignments

Query, 341 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N1B4

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  348 bits (893), Expect = e-100
 Identities = 176/331 (53%), Positives = 239/331 (72%), Gaps = 4/331 (1%)

Query: 1   MLTHRNLVANMLQCKALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISN 60
           MLTH N+V+N+LQ  A     L +G E ++T LPLYHI+A T +C+  +  G +N+LI+N
Sbjct: 225 MLTHGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITN 284

Query: 61  PRDLTAMVKELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSSLKITLSGGMALQLAAAER 120
           PRD+ A V EL K  F+   G+NTLF AL ++E F+ LDFS+LK+++ GGMA+Q A A++
Sbjct: 285 PRDIPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADK 344

Query: 121 WKEVAGCPICEGYGMTETSPVATVNPSQNIQ--IGTIGIPVPSTLCKVIDDAGVEQPLGA 178
           W+ +    + EGYG+TE SP+ T  P  N++   G+IG PV +T  +V D+ G   P G 
Sbjct: 345 WQGITKTRLLEGYGLTEASPLLTCCP-YNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGE 403

Query: 179 IGELCVKGPQVMKGYWQRQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSG 238
            GEL  KGPQVMKGYWQR + T +++D +G+L TGDI  +   G+  IVDRKKDMILVSG
Sbjct: 404 TGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSG 463

Query: 239 FNVYPNELEDVLATLPGVLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKDQVMEHMRANV 298
           FNV+PNE+E+V+A  P VL+ AA+GVP E SGE +K+F+V K   +LT++QV++H R ++
Sbjct: 464 FNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVKVFVVPK-DKSLTEEQVIKHCRHHL 522

Query: 299 TGYKVPKAVEFRDALPTTNVGKILRRELRDE 329
           TGYK+PK VEFRD LP +NVGKILRRELRDE
Sbjct: 523 TGYKIPKLVEFRDELPKSNVGKILRRELRDE 553