Pairwise Alignments

Query, 341 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N1B4

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  360 bits (923), Expect = e-104
 Identities = 176/330 (53%), Positives = 237/330 (71%), Gaps = 2/330 (0%)

Query: 1   MLTHRNLVANMLQCKALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISN 60
           MLTH N+VAN+LQ        L +G E ++T LPLYHI+A T +C+  +  G+ N+LI+N
Sbjct: 225 MLTHSNVVANVLQANGAYSPALRDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITN 284

Query: 61  PRDLTAMVKELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSSLKITLSGGMALQLAAAER 120
           PRD+   V EL K+ F+   G+NTLF AL N+  F +LDFS LK+++ GGMA+Q A A++
Sbjct: 285 PRDIPGFVAELKKYPFTALTGVNTLFNALVNSSDFSELDFSRLKLSIGGGMAVQKAVADK 344

Query: 121 WKEVAGCPICEGYGMTETSPVATVNP-SQNIQIGTIGIPVPSTLCKVIDDAGVEQPLGAI 179
           W+ +    + EGYG+TE SP+ T  P + +   G+IG P PSTL +V DDAG   P G  
Sbjct: 345 WQNITKTRLLEGYGLTEASPLLTCCPYNLDGYNGSIGFPAPSTLIQVRDDAGNVLPQGET 404

Query: 180 GELCVKGPQVMKGYWQRQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGF 239
           GEL  KGPQ+MKGYWQR + T +++D++GWL TGDI  +   G+  IVDRKKDMILVSGF
Sbjct: 405 GELFGKGPQIMKGYWQRPEETAKVIDNDGWLATGDIGYMDEQGFFYIVDRKKDMILVSGF 464

Query: 240 NVYPNELEDVLATLPGVLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKDQVMEHMRANVT 299
           NV+PNE+E+V+A  P V++ AA+GVP++ SGE +K+F+V K   +LT + +++H R ++T
Sbjct: 465 NVFPNEVEEVVALHPKVIEVAAVGVPNDASGELVKVFVV-KKDKSLTAEDIIKHCRVHLT 523

Query: 300 GYKVPKAVEFRDALPTTNVGKILRRELRDE 329
           GYKVPK VEFRD LP TNVGKILRRELRDE
Sbjct: 524 GYKVPKLVEFRDELPKTNVGKILRRELRDE 553