Pairwise Alignments

Query, 281 a.a., Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 272 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 14/241 (5%)

Query: 13  LFAASAAVMGAAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVA 72
           L AA A       A  S L+ ++ARG+L VG  +   P+     +G   GFDIDIA+ +A
Sbjct: 15  LLAAPAMAADIELAKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAKEMA 74

Query: 73  KGLFNDPSKVEFVVQSS--DARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVG 130
           + +      V+FV  ++  D  IP LL+DK D+    +TVT  R  ++ F  PY   G  
Sbjct: 75  RAM-----GVKFVPVNTDFDGMIPALLSDKFDIIISGMTVTQERNLKINFADPYIVVGQT 129

Query: 131 LLL--PANSKYKEIDDLKAAGDGVIVAVLQNVYAEELVHQALPKAKVDQYD-SVDLMYQA 187
           +LL      K K   DL +    V+  +      EE   + LPKAK   +D   D   + 
Sbjct: 130 VLLSKKLEGKVKSWKDLNSPEYTVVSRL--GTTGEEAAKRMLPKAKFKSFDKEADGALEV 187

Query: 188 VNSGRADAAATDQS-SVKYLMVQNPGRYRSPAYAWSPQTYSCAVKRGDQDWLNFVNTVLH 246
           VN GRADA   D   +V ++  Q   +       ++ +     +K+GD D+LNF+N  + 
Sbjct: 188 VN-GRADAWVYDMPFNVVFMAEQGKDKVVHLDKPFTYEPLGFGIKKGDPDFLNFLNNFMR 246

Query: 247 E 247
           +
Sbjct: 247 Q 247