Pairwise Alignments

Query, 220 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

Subject, 229 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  121 bits (304), Expect = 9e-33
 Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 2/200 (1%)

Query: 21  GFLTSVQCSALAILLGTLVGIVAGLVLTYGTFWMRAPFRFYVDIIRGTPVFVLVLACFYM 80
           G   SV  +   I     +G+  GL+     +W+R P   YV+IIRG P+ +L+   +++
Sbjct: 25  GLAMSVVLAIGGIFGAFWLGLGFGLLRLSDRWWLRLPAIIYVEIIRGIPLLMLIFWFYFL 84

Query: 81  AP-ALGWQISAFGAGTLGLTLFCGSHVAEIVRGALQALPSGQMEASKAIGLTFYQALGYV 139
           AP  LG  +    +  +   +F G+++AEIVR  + ALP GQMEA++  GL+  QA+ YV
Sbjct: 85  APIVLGRTLPEAESALVAFIVFTGAYIAEIVRAGVLALPHGQMEAARGTGLSKSQAMIYV 144

Query: 140 LLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMT-LEFYLFAGLL 198
           +LPQALR ++P++VN    + K ++L  +IGV+EL  +  QI  R      E +    +L
Sbjct: 145 ILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSELTRTATQINNRELTAPAELFFTIAVL 204

Query: 199 FFIINYAIELLGRHIEKRVA 218
           +FI+ + +    R +E+++A
Sbjct: 205 YFIVCWTLTAASRRMERQMA 224