Pairwise Alignments

Query, 220 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

Subject, 596 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  119 bits (298), Expect = 1e-31
 Identities = 64/200 (32%), Positives = 114/200 (57%), Gaps = 2/200 (1%)

Query: 21  GFLTSVQCSALAILLGTLVGIVAGLVLTYGTFWMRAPFRFYVDIIRGTPVFVLVLACFYM 80
           G   S+  + +AI +   +G+  G+  +      R P   Y+++IRG P+ +++   ++ 
Sbjct: 389 GLAYSLLMAVIAISVSFFIGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVYFF 448

Query: 81  APAL-GWQISAFGAGTLGLTLFCGSHVAEIVRGALQALPSGQMEASKAIGLTFYQALGYV 139
            P + G  ++ F + T  LT F G+++AEIVR  +Q +P+GQ+EA+ + GLT+ QA+  +
Sbjct: 449 IPVMFGTTLNVFWSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMRRI 508

Query: 140 LLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFM-TLEFYLFAGLL 198
           +LPQAL+Q++P  V     I K ++L  V+GV EL    Q I  R  +  +E Y     L
Sbjct: 509 VLPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMIHPMEIYGTVAFL 568

Query: 199 FFIINYAIELLGRHIEKRVA 218
           +FI  Y++ +    +E+R++
Sbjct: 569 YFICCYSMSVFAARLERRLS 588



 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 13/204 (6%)

Query: 25  SVQCSALAILLGTLVGIVAGLVLTYGTFWMRAPFRFYVDIIRGTPVFVLVLACFYMAPAL 84
           S+  SALA+LLGT++G+ A L L      +R      ++  R TP+ + +   ++  PA+
Sbjct: 68  SLISSALALLLGTMLGL-ARLSLFRP---LRVTATCVIEFFRNTPLLIQLFFWYFAFPAI 123

Query: 85  GWQISA---------FGAGTLGLTLFCGSHVAEIVRGALQALPSGQMEASKAIGLTFYQA 135
               +          F   T+GL+++  S +AE++R  LQ++P G +EA+ + GL+++Q 
Sbjct: 124 LPDNAREALFSIQFEFWCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQV 183

Query: 136 LGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEFYLFA 195
           L  ++LP A R I+P   +     +K S+L  V+GVAEL    QQ+ + TF   E    A
Sbjct: 184 LRTIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWHAQQVESLTFKGFEATSAA 243

Query: 196 GLLFFIINYAIELLGRHIEKRVAL 219
            +L+  ++  I  +   +  R+ L
Sbjct: 244 TVLYLSLSLIISFILNGVNGRMRL 267