Pairwise Alignments

Query, 220 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  122 bits (307), Expect = 6e-33
 Identities = 66/209 (31%), Positives = 122/209 (58%), Gaps = 9/209 (4%)

Query: 17  VLWQGFLTSVQCSALAILLGTLVGIVAGLVLTYGTFWMRAPFRFYVDIIRGTPVFVLVLA 76
           +L +G   +++ S LAI++G ++G+V GL        +R     Y++IIRG+P+ V V  
Sbjct: 126 ILLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFL 185

Query: 77  CFYMAPAL--------GWQ-ISAFGAGTLGLTLFCGSHVAEIVRGALQALPSGQMEASKA 127
            +++   L        G   I     G + L +F G++VAEIVR  +Q++  GQMEA+++
Sbjct: 186 WYFVVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARS 245

Query: 128 IGLTFYQALGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFM 187
           +G+++ Q++  V+LPQA R+I+P        +VK S+LL VI V EL  +T++++  +  
Sbjct: 246 LGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQ 305

Query: 188 TLEFYLFAGLLFFIINYAIELLGRHIEKR 216
             E ++   LL+ ++ + + L  +++E+R
Sbjct: 306 PFELWIVCALLYLVLTFTLSLCVQYLERR 334