Pairwise Alignments

Query, 349 a.a., RecA protein from Pseudomonas fluorescens FW300-N1B4

Subject, 345 a.a., recombinase RecA from Rhodanobacter denitrificans MT42

 Score =  476 bits (1225), Expect = e-139
 Identities = 241/326 (73%), Positives = 274/326 (84%)

Query: 4   NEGKQKALKQALEQIERQFGKGSVMRMGDNERVQIDAISTGSLGLDAALGIGGLPKGRIV 63
           ++ K+KAL  AL QIE+QFGKG+VMRMGD     I+ ISTGSLGLD ALG+GGLP+GR+V
Sbjct: 2   DDNKRKALTSALGQIEKQFGKGAVMRMGDRVNEAIETISTGSLGLDIALGVGGLPRGRVV 61

Query: 64  EIYGPESSGKTTLTLSVIAQAQKAGCTCAFVDAEHALDPEYAGKLGVIVDDLLVSQPDTG 123
           EIYGPESSGKTT+TL  IA  Q+AG T AF+DAEHALDP YA KLGV VDDLLVSQPDTG
Sbjct: 62  EIYGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTG 121

Query: 124 EQALEITDMLVRSNAVDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 183
           EQALEI DMLVRS AVD++VVDSVAAL PKAEIEGEMGD HVGL ARLMSQALRK+T NI
Sbjct: 122 EQALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANI 181

Query: 184 KNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKDGDEVTGSAT 243
           K + CLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR GAVK G+E+ GS T
Sbjct: 182 KKSGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKKGEEIIGSET 241

Query: 244 RVKVVKNKVSAPFRQAEFEIIYGAGINTMAEIIDLGSAAGLIEKSGSWYSYKGEKIGQGK 303
           RVKVVKNKV+ PFRQ EFEI+YG G +   EII+LG A  LI+KSG+WYSY G++IGQGK
Sbjct: 242 RVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQGK 301

Query: 304 ANSCIYLKEHPAVAAELDTAIREAKL 329
            N   +L+++PA+A E+D  +RE  L
Sbjct: 302 ENVRQFLRDNPAIANEIDKQLRERLL 327