Pairwise Alignments

Query, 349 a.a., RecA protein from Pseudomonas fluorescens FW300-N1B4

Subject, 355 a.a., recombinase RecA from Pseudomonas sp. BP01

 Score =  537 bits (1383), Expect = e-157
 Identities = 281/348 (80%), Positives = 304/348 (87%), Gaps = 2/348 (0%)

Query: 4   NEGKQKALKQALEQIERQFGKGSVMRMGDNERVQIDAISTGSLGLDAALGIGGLPKGRIV 63
           ++ K++AL  AL QIERQFGKG+VMRMGD ER  I AISTGSLGLD ALGIGGLPKGRIV
Sbjct: 2   DDNKKRALAAALGQIERQFGKGAVMRMGDQERQGIPAISTGSLGLDIALGIGGLPKGRIV 61

Query: 64  EIYGPESSGKTTLTLSVIAQAQKAGCTCAFVDAEHALDPEYAGKLGVIVDDLLVSQPDTG 123
           EIYGPESSGKTTLTLSVIA+AQK G TCAFVDAEHALDPEYAGKLGV VDDLLVSQPDTG
Sbjct: 62  EIYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121

Query: 124 EQALEITDMLVRSNAVDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 183
           EQALEITDMLVRSNAVDVI+VDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181

Query: 184 KNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKDGDEVTGSAT 243
           KNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVK+GDEV GS T
Sbjct: 182 KNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSET 241

Query: 244 RVKVVKNKVSAPFRQAEFEIIYGAGINTMAEIIDLGSAAGLIEKSGSWYSYKGEKIGQGK 303
           RVK+VKNKVS PFRQAEF+I+YG GI    EIIDLG + GL+EKSG+WY+Y+G KIGQGK
Sbjct: 242 RVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGK 301

Query: 304 ANSCIYLKEHPAVAAELDTAIREAKLPKLSATPDSNSDKV--PEDDVA 349
           AN+  YL E+PA+ AE++  IRE  L   +A   S +  V    DDVA
Sbjct: 302 ANAAKYLAENPAIGAEIEKQIREKLLKAGAAAEASKAAAVDASADDVA 349