Pairwise Alignments

Query, 273 a.a., Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 303 a.a., prepilin peptidase (RefSeq) from Shewanella loihica PV-4

 Score =  188 bits (478), Expect = 1e-52
 Identities = 109/295 (36%), Positives = 161/295 (54%), Gaps = 33/295 (11%)

Query: 1   MSGVLEQLAFYPSLYIPIFGIVGLMIGSFLNVVIYRLPKMLEAEWRAAAREYLAMDE--- 57
           M+  ++ +A YP L+  I  +   +IGSFLNVVI+RLP M++ EW+    +YL  DE   
Sbjct: 1   MTEFIQLMAQYPLLFAAISFVFAAVIGSFLNVVIHRLPVMMKREWQEECNQYL--DEYHK 58

Query: 58  ---------------ETPERFNLAVPCSACPSCKRSIRPWENIPVLSYVALRGKCGGCSM 102
                          + PE++NL VP S+CP CK  I+PW N+PV+ ++ L GKC  C  
Sbjct: 59  ATVTEIKDKLAQPIDDFPEKYNLIVPGSSCPKCKTDIKPWHNLPVIGWLMLGGKCAHCKT 118

Query: 103 RISVRYPLVELLGAGAGLLAGWQFGLSLEALAMASVFWTLIALALIDHDTMMLPDSLCLP 162
            ISVRYP++E L   A     + FG + + +    + + LIAL  ID D M+LPD + LP
Sbjct: 119 SISVRYPIIEALTGFAVAYLAYHFGPTWQFVFATLLTFGLIALTGIDLDEMLLPDQITLP 178

Query: 163 LLWAGLVFVAIVAPDQLAAHVIGAATGYLA-------FRVLP----IGEGDAKLAAACGA 211
           LLW GL+         +   VIGA+ GY++       F++L     +G GD KL A  GA
Sbjct: 179 LLWLGLLINLNGTYVSITDAVIGASAGYMSLWSVFWGFKILTGKEGMGYGDFKLLAVFGA 238

Query: 212 WLGWAALPFFVSVGAGISCLMWVLLYFRNK--ASRQYPFGPALAVAFVLAVFYGK 264
           W GW  LP  + + + +  L+ +LL    K  +    PFGP +A+A  +A+ +G+
Sbjct: 239 WFGWQLLPLIILLSSIVGALVGLLLIVNKKINSGNPIPFGPYIALAGWIAMIWGE 293