Pairwise Alignments

Query, 289 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 290 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (249), Expect = 4e-26
 Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 2/277 (0%)

Query: 5   LKQIGVILTLSLTVAACSRVGLAYRNLDVIIPWTLSDYLEMNHEQKDWFNERLKEHLSWH 64
           +K+  ++L + L ++ACS    +Y  LD  I W L DY+ +N  Q+   ++ +++ + WH
Sbjct: 1   MKKTMLLLVMLLGLSACS-TKFSYHFLDWAIGWELDDYVTLNKTQQKSMDKLIEKFVLWH 59

Query: 65  CTTQLPGYLDWLDRLQAMVEANQITDAALQTRTHEAKQAIADTAREITPSAIELLQGLDD 124
            + +L  Y+  L  ++ +++ N +T A        AK+          P  + ++  L +
Sbjct: 60  QSEELTHYVAQLTEVEHLIQTNTLTPALWAEHVTLAKRHWFRLFEFALPDMLPIIGSLTE 119

Query: 125 KQVAEMNDAFAKDQRKRQEAYLKPSLEQQIRERSKRMEKRLNDWLGPLNPSQQQRVVAWS 184
            QV ++     KD+++  + +   + EQ  ++    + ++ NDWLG ++  Q+Q +  ++
Sbjct: 120 AQVKQILAQSRKDEQELIKEFAGKTPEQLQQDADDNLNEQFNDWLGSVSDEQKQLIHQYN 179

Query: 185 NALGDQNRQWIANRVHWQQQFSAAVAQRQS-PEFPQRIETLLVNRESLWTPAYREAYANT 243
                    W+  R  W +QF  A+ QR   P   +R+  L+   + L +  +R      
Sbjct: 180 QQRLSTLDMWLDYRHEWLRQFEIALGQRSDIPLLTERLTLLMTQPDELKSEKHRAILRQN 239

Query: 244 EAQARALLVDVMAESTPVQRERLLQKIEGVRKDFADL 280
                ALL+ + A  +P Q +   +K+  + +D  +L
Sbjct: 240 TEAFGALLLAINASLSPKQSKHFYKKLNKLIQDLREL 276