Pairwise Alignments

Query, 338 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 341 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  114 bits (285), Expect = 4e-30
 Identities = 93/334 (27%), Positives = 146/334 (43%), Gaps = 12/334 (3%)

Query: 6   SVAVYFMYPMIHALRE--EPQRLRSVLEQVGIDPALMDKPTA-----RVPATAFAALWLV 58
           +V++ F+   + AL+   +  ++  +L   G+      KP A     RV       L+ +
Sbjct: 11  TVSLPFIEDWLSALQASCDVDQIHRILTHSGLSQLANSKPAANRATQRVTLDQIVELYQI 70

Query: 59  QIRELNDEFFRLDSHGMPPGSFALICRALIQEPTLEKAMRQCLANFALFLSDFRGTLSVR 118
              E  DE   L S  + P +   +   + +   L  A+ +    + L L D+   L   
Sbjct: 71  AAAETGDEMPGLWSRPVRPRALQHLLTTVREAGNLPAALYRFSTFWNLILDDYHIELKSE 130

Query: 119 GKRAVISLQTRAQDNEVSRLGEETFLVLMISLLCWLGGRRIPIDRADFRHQRLSLRDD-A 177
                +SL  R    E  R G    L L   LL WL G  +P+    F   +     D  
Sbjct: 131 ESCISLSLVPRGAQ-ETHRFGHMLLLKLAHGLLSWLAGYEVPVQAVQFAFDQPGFAQDYG 189

Query: 178 MLWGPNLTFGTERTEIEFASHYLRLPVIQDLASLKVFLRTAPQ-WLVIRFRNQHGLTSQV 236
           +++   + F    + I F    L  P  +  A L  FL  AP+ W+   FR +H L+ Q+
Sbjct: 190 VIFPAPVRFSQLCSAISFDPQQLGPPQPRSPAELAAFLDRAPRDWIFTGFR-EHRLSLQI 248

Query: 237 HQRLRHSHYSEWPTLQAFALEQHLSPSTFRRKLGREGCSYQEIKDEVRRAVAFERLRQSK 296
              L  S++ +     A A+  +++P T  R+L  E  S+Q IKD +RR +A   LR   
Sbjct: 249 RDFLYRSNWEDCRLGDAAAM-LNVTPRTLMRRLEDEAASFQSIKDALRRDIAIRDLRAGH 307

Query: 297 ASISDIAEQLGFQEPSAFHRAFKKWTGESPGRYR 330
            SI DI+  LGF   + FHRAF++WTG +   YR
Sbjct: 308 KSIEDISHDLGFSSSANFHRAFRRWTGGTTSSYR 341