Pairwise Alignments

Query, 338 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 339 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  125 bits (314), Expect = 2e-33
 Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 5/316 (1%)

Query: 16  IHALREEPQRLRSVLEQVGIDPALMDKPTARVPATAFAALWLVQIRELNDEFFRLDSHGM 75
           + AL  E Q + S+L + G++ A    P  RV       L+ +   E  DE   L S  +
Sbjct: 24  LRALCPEAQ-MASLLSRSGLN-ADTRSPNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPV 81

Query: 76  PPGSFALICRALIQEPTLEKAMRQCLANFALFLSDFRGTLSVRGKRAVISLQTRAQDNEV 135
            P +   +   + +  +L  A+ +    + L L D++  L        +SL  +  D  V
Sbjct: 82  RPRALQHLLTTVREATSLPSALYRFSTFWNLLLDDYQFDLDDTDSALTLSLNPQT-DAPV 140

Query: 136 SRLGEETFLVLMISLLCWLGGRRIPIDRADFRHQRLSLRDD-AMLWGPNLTFGTERTEIE 194
            R G    L L   L+ WL G  +P+   DF   R     D A+++     FG   T I 
Sbjct: 141 QRFGHMLILKLAHGLMSWLAGHEVPVKAVDFAFHRPDFNQDYAIIFPAPFQFGQPATAIS 200

Query: 195 FASHYLRLPVIQDLASLKVFLRTAPQWLVIRFRNQHGLTSQVHQRLRHSHYSEWPTLQAF 254
           F+ + L     +  + L  FL+ AP+  +     +H  + +V   L  + +    TL   
Sbjct: 201 FSPNALGPVQARSTSDLDRFLQNAPRDWIFTSSREHTQSLRVRTYLGQTGWDA-ATLTQT 259

Query: 255 ALEQHLSPSTFRRKLGREGCSYQEIKDEVRRAVAFERLRQSKASISDIAEQLGFQEPSAF 314
           A   H++P T  R+L  +G S+Q IKD +RR +A   L+  + S+  IA  +GF   + F
Sbjct: 260 ASAMHMTPRTLIRRLQADGTSFQAIKDALRRDIAIRDLQAGRKSVEAIAHDVGFSSAANF 319

Query: 315 HRAFKKWTGESPGRYR 330
           HRAF++WTG +P  YR
Sbjct: 320 HRAFQRWTGSTPSSYR 335