Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 310 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  210 bits (535), Expect = 3e-59
 Identities = 113/265 (42%), Positives = 163/265 (61%), Gaps = 3/265 (1%)

Query: 21  RLAMGLGLTILFGWLVLAIFAPWIAPFDPIAQN-TDIRLVAPHL-AHPFGTDNFGRDVLS 78
           RLA+ LGL IL   + +AIFA  +AP  P+  N    RL+ P    +  GTD+ GRD+LS
Sbjct: 43  RLAV-LGLCILLALVFVAIFADALAPHSPVIGNLAGARLLPPGSEGYLLGTDDQGRDILS 101

Query: 79  RVIWSARIDLQLAVIGVIFPFLIGTCVGALSGYIGGRFDTFCMRLIDIILAFPFLVLMLA 138
           R+I  +R+ L + ++  I    +G  VGA++GY GG  D   MR+ DI LAFP LVL LA
Sbjct: 102 RLIHGSRLTLLVVLLVAIIAAPVGLIVGAVAGYAGGWVDAVLMRITDIFLAFPKLVLALA 161

Query: 139 IMAILGPGLMSFYIAMALVGWVSYARLIRSQILILKESDFALAAKSLGFGHGRILFRHLL 198
            +A LGPG+ +  IA+A+  W  YAR+ R++ L ++ SD+  A + +G    RI+FRH++
Sbjct: 162 FVAALGPGIENAVIAIAITSWPPYARIARAETLTVRNSDYIAAVRLMGASPLRIVFRHVM 221

Query: 199 PNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQSFITSAWWICTFP 258
           P  M   IV    D   ++L  A + +LGLG QPP  EWG M+A G+ FI   WW+ T P
Sbjct: 222 PMCMSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQWWVATMP 281

Query: 259 GLAIVTLAMGFSLLADAVAEHLGER 283
           G+AI+ +++GF+LL D + + L  R
Sbjct: 282 GIAILIVSLGFNLLGDGLRDALDPR 306