Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (482), Expect = 4e-53
 Identities = 99/263 (37%), Positives = 155/263 (58%), Gaps = 6/263 (2%)

Query: 27  GLTILFGWLVLAIFAPWIAPFDPIAQNTDIRLVAP------HLAHPFGTDNFGRDVLSRV 80
           GL  +   +++A+FAP +AP  P   N  +  + P        ++  GTD  GRD+LSR+
Sbjct: 60  GLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRI 119

Query: 81  IWSARIDLQLAVIGVIFPFLIGTCVGALSGYIGGRFDTFCMRLIDIILAFPFLVLMLAIM 140
           I+ AR+ L +  + V    + G  +G L+G++ G  D   MRL+DIIL+ P L+L +AI+
Sbjct: 120 IFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIV 179

Query: 141 AILGPGLMSFYIAMALVGWVSYARLIRSQILILKESDFALAAKSLGFGHGRILFRHLLPN 200
           AILGPGL +   A+A+V    Y RL R+ ++     D+  A++  G   GR++ + +LPN
Sbjct: 180 AILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPN 239

Query: 201 AMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQSFITSAWWICTFPGL 260
            +   IV +       +L+ AA+ +LGLG +PP  EWGTM++E + F+ S WWI TFPGL
Sbjct: 240 TLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGL 299

Query: 261 AIVTLAMGFSLLADAVAEHLGER 283
           AI+   + F+L+ D + + L  R
Sbjct: 300 AILFTVLAFNLMGDGLRDALDPR 322