Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 284 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  213 bits (543), Expect = 3e-60
 Identities = 116/283 (40%), Positives = 161/283 (56%), Gaps = 2/283 (0%)

Query: 1   MSSQATTVPRLNLRLGLRNPRLAMGLGLTILFGWLVLAIFAPWIAPFDPIAQNTDIRLVA 60
           MS+     PR  L    R+P LA GL L +       A+ APWIAP DP A N    L  
Sbjct: 1   MSAADLFSPRRWLLFWTRHPMLATGLSLVLAMS--AAALLAPWIAPHDPTALNLTAILQP 58

Query: 61  PHLAHPFGTDNFGRDVLSRVIWSARIDLQLAVIGVIFPFLIGTCVGALSGYIGGRFDTFC 120
           P  AHP GTD  GRDVLSR++  AR+ L +  + V     IG  +G  +GY GG  D   
Sbjct: 59  PSSAHPLGTDALGRDVLSRMLHGARVSLWVGFVSVGISVAIGLALGLAAGYFGGLADELI 118

Query: 121 MRLIDIILAFPFLVLMLAIMAILGPGLMSFYIAMALVGWVSYARLIRSQILILKESDFAL 180
           MR +DI+L FP   L+LA++A L P L++    + L  W+  ARL+R++ L L+E DF  
Sbjct: 119 MRCVDIMLCFPSFFLILAVIAFLEPSLLNIMAVIGLTSWMGVARLVRAETLSLRERDFIA 178

Query: 181 AAKSLGFGHGRILFRHLLPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTM 240
           AA+  G G  RIL  H+LPNA+   +V +       +L  +A+S+LGLGVQPP   WG M
Sbjct: 179 AARLAGAGPVRILCLHVLPNAVAPVLVSATLGVAGAILTESALSFLGLGVQPPMPSWGNM 238

Query: 241 VAEGQSFITSAWWICTFPGLAIVTLAMGFSLLADAVAEHLGER 283
           + EG+  +  A W+  FPG AI+   +G++LL +++ + L  R
Sbjct: 239 LLEGKDVLEIAPWLSVFPGCAILLTVLGYNLLGESLRDLLDPR 281