Pairwise Alignments

Query, 428 a.a., Nitrate ABC transporter, nitrate-binding protein from Pseudomonas fluorescens FW300-N1B4

Subject, 455 a.a., nitrate transporter substrate-binding (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  204 bits (520), Expect = 3e-57
 Identities = 134/417 (32%), Positives = 204/417 (48%), Gaps = 48/417 (11%)

Query: 56  EKAALKVGFIPLTDCASVVVAATQGFGEKYGLTITPSKEASWAGVRDKLLNGELDAAHVL 115
           EK  LK GFI LTD A + +A  +G+    GL +T   +A+W  + D +++G+LD AH+L
Sbjct: 26  EKDELKFGFIKLTDMAPLAIAYERGYFFDEGLFVTLEAQANWKVLLDGVISGQLDGAHML 85

Query: 116 YGLIYGVQLGIGGPQKDMAMLMGLNQNGQAITLSNQLQQAGVTNGEQL----------AA 165
            G      +G G  Q  +     ++ NG  IT+SN++ +    N  ++          A+
Sbjct: 86  AGQPLAATIGYG-TQAHIVTPFSMDLNGNGITVSNEIWEQMKPNIPKMEDGRPQHPISAS 144

Query: 166 KVKQ-------GGTPLTFAQTFPTGTHAMWLNYWLASLGINP------------LTDVKT 206
            +K         G P      FP  TH   L YWLA+ GI+P              +   
Sbjct: 145 ALKPIVDEYNASGRPFNMGMVFPVSTHNYELRYWLAAGGIHPGFYSPEDVSGQINAEAFL 204

Query: 207 IVVPPPQMVANMRVGNMDGFCVGEPWGARAIADNIGFTALTTQKLWPDHPEKILGTTRAF 266
            V PPPQM A +  G + G+CVGEPW  +A+   IG   +T  ++W ++PEK+ G T AF
Sbjct: 205 SVTPPPQMPATLEAGTIYGYCVGEPWNQQAVFKGIGVPVITDYQIWKNNPEKVFGLTAAF 264

Query: 267 VEQYPNTARALTMAVLDASRFI-EASVENKKSTAQLIAGKAYVNAPVEVIEQRFLGHYDD 325
           VE+ PNT  A+T A++ A+ ++ E    N+    ++++   YV A  +VI     G ++ 
Sbjct: 265 VEENPNTTLAITKALIRAAIWLDENDNANRPEAVEILSRPNYVGADYDVIANSMTGFFEF 324

Query: 326 GLGKQWTDEHAMSFCKDGSVNYPYLSDGMWFLTQFRRWGLLKE---DVDYAGVAKSINQT 382
             G +  D    +     +  YP+ SD +W+LTQ RRWG + E   D  Y  VA+ + + 
Sbjct: 325 EKGDR-RDIPDFNVFFRYNATYPFYSDAVWYLTQMRRWGQISEAKPDSWYDEVARMVYKP 383

Query: 383 KLYGEAASQL---GLTVPG----------SPLRSSTLIDGKVWDGSNPAAYANSFTI 426
           ++Y EAA  L   GL              +P  +  +IDG  +DG  P AY  S TI
Sbjct: 384 EIYLEAARLLVDEGLADEADFPWDSDGYKAPTPAEDIIDGIAYDGKQPNAYLESLTI 440