Pairwise Alignments

Query, 290 a.a., LysR family transcriptional regulator STM2281 from Pseudomonas fluorescens FW300-N1B4

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  105 bits (263), Expect = 9e-28
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 11/292 (3%)

Query: 6   LEIFSLVAELRGFTAAAHRLEISQSAVSHALKSLEQELGVELLRRHQSQVELSDIGQQLL 65
           L  F  + E   FT AA +  I+Q  +S  ++ LE+ LG +LL R+  ++EL+  G  L 
Sbjct: 8   LHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGILLE 67

Query: 66  LRARAMLGLANTLRQEAADARGMKRGTLRIGSFGPTSSIKLLPKILQHYRAAHPGIEVHI 125
             AR +LG  + L+++  +  G+K G LR+G     SS  L+  +L  +R  +PGIE+ +
Sbjct: 68  NSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSS--LIIDLLTAFRQQYPGIELQM 125

Query: 126 DEGPDRQVIQWLEERRIDIGFVVLPLE---RFDTFGLIEDQMVALLPADHALAGRDSLSL 182
            E       Q L    +DI F  LP           L    ++A LP DHALA +++++ 
Sbjct: 126 YEYGGFGCEQALLNNSLDIAFTALPTTHDIELANRALTRYPLLACLPKDHALAQQEAVTW 185

Query: 183 SDLCHDPFVL--TEAGSSELVSRLFNAARLTPNIRYRCSQ--LLSTLDTVGRGDALTVVA 238
            D    PF+L   +   ++L++RL + A +  NI +R  Q   L+T+     G  + ++ 
Sbjct: 186 QDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMG--VAILP 243

Query: 239 EGSLPDHNDNRYVKKPLSPPVSRQVGLAVLDQRQSSPATQAFIKLASSLNDH 290
           E        +  V KP+ P ++  + L        +PA QA + L+   + H
Sbjct: 244 EPICHKLQGSELVFKPIRPNLTWDLALIWRKDLPLTPAAQALLDLSEQAHLH 295