Pairwise Alignments

Query, 290 a.a., LysR family transcriptional regulator STM2281 from Pseudomonas fluorescens FW300-N1B4

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (251), Expect = 2e-26
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 13/291 (4%)

Query: 1   MTLTQLEIFSLVAELRGFTAAAHRLEISQSAVSHALKSLEQELGVELLRR--HQSQVELS 58
           M + QL+    +A    FTAAA +L ++Q A+S ++K LE  LGV L+ R  ++    L+
Sbjct: 1   MDIRQLKHLDALAITGSFTAAAKKLNMAQPALSQSIKRLELSLGVTLINRTSNKHDKHLA 60

Query: 59  DIGQQLLLRARAMLGLANTLRQEAADARGMKR---GTLRIGSFGPTSSIKLLPKILQHYR 115
              + L+L   A L +   ++Q  A  R M     G +RI   G   S   LP  L  +R
Sbjct: 61  LTAEGLVLHQHATL-ILKQIKQAEAQIRAMANLTSGEVRIAVPGMLGSF-YLPSRLMAFR 118

Query: 116 AAHPGIEVHIDEGPDRQVIQWLEERRIDIGFVVLP--LERFDTFGLIEDQMVALLPADHA 173
             +P +++ + EG  R  ++ L++  +DI  +        FD+  LI +QMV  + A+H 
Sbjct: 119 HQYPELKLSLFEGGTRDALRMLQQEEVDIAIITAQDLQPDFDSQLLIREQMVIAMGAEHP 178

Query: 174 LAGRDSLSLSDLCHDPFVLTEAGSSELVSRLFNAARL--TPNIRYRCSQLLSTLDTVGRG 231
           LA   ++SL+D      V+ + G       L  A  L   PNI +  + +      V +G
Sbjct: 179 LAELPAVSLNDFFDHELVMFKTGYFHREWILSQAKDLGKKPNIAFETNLINLIKQIVSQG 238

Query: 232 DALTVVAEGSLPDHNDNRYVKKPLSPPVSRQVGLAVLDQRQSSPATQAFIK 282
             +T V E ++   +D   + KP  PPV   + +A   QR  S A +AF++
Sbjct: 239 FGITSVLEMAISPKDD--ILAKPFDPPVFLNLHIAWKKQRPVSQADRAFVE 287