Pairwise Alignments

Query, 290 a.a., LysR family transcriptional regulator STM2281 from Pseudomonas fluorescens FW300-N1B4

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  106 bits (264), Expect = 7e-28
 Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 11/286 (3%)

Query: 6   LEIFSLVAELRGFTAAAHRLEISQSAVSHALKSLEQELGVELLRRHQSQVELSDIGQQLL 65
           L+ F  + E   FT AA +  I+Q  +S  ++ LE+ LG  LL R+  +VEL+  GQ   
Sbjct: 8   LQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQLFE 67

Query: 66  LRARAMLGLANTLRQEAADARGMKRGTLRIGSFGPTSSIKLLPKILQHYRAAHPGIEVHI 125
             AR +LG  + L+++ ++  G+K G LR+G     SS  L+  +L  YR  +PG+E+ +
Sbjct: 68  HSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSS--LIIGLLTSYRKRYPGVELQM 125

Query: 126 DEGPDRQVIQWLEERRIDIGFVVLPLERFDTF---GLIEDQMVALLPADHALAGRDSLSL 182
            E       Q L    +DI F  LP           L +  ++A LP  H LA +  LS 
Sbjct: 126 YEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYLSW 185

Query: 183 SDLCHDPFVL--TEAGSSELVSRLFNAARLTPNIRYRCSQ--LLSTLDTVGRGDALTVVA 238
            D    PF+L   +   ++L++RL   A +  NI +R  Q   L+T+     G  L ++ 
Sbjct: 186 QDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMG--LAILP 243

Query: 239 EGSLPDHNDNRYVKKPLSPPVSRQVGLAVLDQRQSSPATQAFIKLA 284
           E      ++++ V +P+ P ++  + L        +PA  A ++L+
Sbjct: 244 EPICQKLSNSKLVFRPMQPALTWDLALIWRQNLPLTPAANALLELS 289