Pairwise Alignments

Query, 283 a.a., Protein rarD from Pseudomonas fluorescens FW300-N1B4

Subject, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (293), Expect = 3e-31
 Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 9/284 (3%)

Query: 2   LFAVMYYYTSLLSPLSGVEIFGWRMLLTAPCMTVFMVVSGEWKRVVEIVRRLAGKPKLIV 61
           ++ +   Y   L  +S +EI   R++ +   + V + +   W+ VV +V      P+   
Sbjct: 23  MWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGVVHT----PRKFW 78

Query: 62  GLIGSAVLLGLQLWLFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGERLSYLQKIAVF 121
            L+ +A+L+G    +F+W+    + LD SLGY++ PL  VL G +  GERL  LQ  AV 
Sbjct: 79  LLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLRKLQWFAVA 138

Query: 122 FASLGVLNELYQVGGFSWATLLVVVGYPIYFILRKRLATDNLGGLWLDMALMLP-VAFWF 180
            A++GV  +L   G      + +   +  Y +LRK++  D   GL+L+   MLP  A + 
Sbjct: 139 LAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFMLPAAAIYL 198

Query: 181 VQGGEQGFGVFDQHPW-LSLLIPILGVISASALVVYIIASRLLPFSLFGLLSYVEPVLLL 239
           +   +        + W L+LL+   GV++   L+ +  A+  L  S  G   Y+ P L+ 
Sbjct: 199 IWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQYIGPSLMF 258

Query: 240 GVALLL-GESIKAGEWLTYIPIWLAVLVLVFEGFK--HLVRQRR 280
            +A+L+ GE+  + + +T+  IW A+++   +G K  H  R+ R
Sbjct: 259 LLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 302