Pairwise Alignments

Query, 490 a.a., FIG01200701: possible membrane protein from Pseudomonas fluorescens FW300-N1B4

Subject, 483 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (444), Expect = 3e-48
 Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 56/494 (11%)

Query: 18  SSCLAQPLDASATTSASST-APVTSVAKDAVFTQEQLDQMLAPIALYPDPLLAQVLMATT 76
           S+ +  PL +  T+ A +  +  +S  +   F++ +L ++LAPIALYPD LL  +L+A++
Sbjct: 11  SALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDTLLTHILIASS 70

Query: 77  YPGEIAEAVTWSKAHPDAKGDDAVKQVANQPWDPSVQALVAFPQVMATLGQDPVWVQRLG 136
           YP E+ EA  W + +        + +   Q WDPSV AL+AFP V+  +  D  W + LG
Sbjct: 71  YPLEVVEAQRWREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMSDDLNWTRDLG 130

Query: 137 DAFLAQPDDVMGGVQRLRHQAQAAGNLQSNQYQNVTVQAAPASAAPAPAPATSTSTIIIQ 196
           DAFLA  + V+  +Q LR +A  AGNL      N+ V+  P             + III+
Sbjct: 131 DAFLADEEAVLDSIQMLRREADRAGNLDGG--DNLVVKRQP-------------TQIIIE 175

Query: 197 PSDPQVVYVPTYNPTTTYGTWPYPASPPVYYPPPPAYYPGSALLAGLAFGTGVAI-IGSL 255
              P+++YVP Y+P   YG W +   PPVY+ P P Y    +      + +G++I     
Sbjct: 176 SPSPEIIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYV---SYHRHFGWHSGISISFNFY 232

Query: 256 WGDCDWDNNDIDIDVDRYNNINRNNQ----ITRNQNNWQHNAVHRDGVPYRDSKSREQYG 311
           + +  W   D  + V  +++  R  +    I++    W+H+  HR GV YR +  R+++ 
Sbjct: 233 FSNFHW--YDRHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFN 290

Query: 312 RQLDGARQREAYRGDNAQR---------------AQARE---KARGSMDKHGIERPATSN 353
                  +R+  R D   R               +Q+RE   KAR +  +   E    S+
Sbjct: 291 VSTPSRIERDHRRHDEYSRVVSQQHNPQVRSRELSQSREQEFKARMNSSERRFENNGNSS 350

Query: 354 REARDSARKAQSATSPGNRMQAGTDRPKASDRSQGTARSTRENQQPRKQTAQVNQRGQGD 413
           RE RD    ++     G++      R + + R +  +R   +N++ R ++ + +Q  Q  
Sbjct: 351 RE-RDVGNSSRE-RDMGHQSHDRELRQQLNSRERADSRERMDNRE-RMESRERSQPQQRG 407

Query: 414 LQGRQTAQKRPAASTGSAGSARNNAFAGVRSPSQANAQASRGQASQASARRPSASRPAGH 473
            + R+  ++R                A    P +   Q  R + +Q  AR+    +P  H
Sbjct: 408 FEQREPQRERQQFQ-------ERQRDAQPAQPREQQVQRERQREAQHDARQ-QRQQPREH 459

Query: 474 QVSRPSSP-PARQR 486
           Q  +   P P R+R
Sbjct: 460 QQPQRERPQPQRER 473