Pairwise Alignments

Query, 490 a.a., FIG01200701: possible membrane protein from Pseudomonas fluorescens FW300-N1B4

Subject, 501 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  171 bits (433), Expect = 5e-47
 Identities = 131/463 (28%), Positives = 213/463 (46%), Gaps = 51/463 (11%)

Query: 30  TTSASSTAPVTSVAKDAVFTQEQLDQMLAPIALYPDPLLAQVLMATTYPGEIAEAVTWSK 89
           T+   +     S    A  +Q +L+QMLAPIALYPD LL+ +L+A+TYP E+ +A  W +
Sbjct: 22  TSPTQAEGVSVSQGSSASLSQAELEQMLAPIALYPDSLLSHILIASTYPLEVVQAQRWLE 81

Query: 90  AHPDAKGDDAVKQVANQPWDPSVQALVAFPQVMATLGQDPVWVQRLGDAFLAQPDDVMGG 149
            +P    D+ + +  ++ WDPSV+AL+AFP V+  + +D  W Q+LG+AFLA    VM G
Sbjct: 82  DNPKLSTDEVMSRTEDKDWDPSVKALMAFPNVLEKMSEDLDWTQKLGEAFLADEGQVMDG 141

Query: 150 VQRLRHQAQAAGNLQSNQYQNVTVQAAPASAAPAPAPATSTSTIIIQPSDPQVVYVPTYN 209
           +Q LR QA  A +L +     VT                + + III+P+  +VVYVP Y+
Sbjct: 142 IQSLRQQADKANSLANMGNMAVT---------------RANNQIIIEPARREVVYVPYYD 186

Query: 210 PTTTYGTWPY-PASPPVYYP-PPPAYYPGSALLAGLAFGTGVAI-IGSLWGDCDWDNNDI 266
           P   YGTW +  A PPVY+       YP     +   +  G+ I     +    W ++ +
Sbjct: 187 PRVVYGTWRWGVAYPPVYWEFGGYVGYPYRPSHSYFYWSPGIHISFNYFFSSFHWHSHRV 246

Query: 267 DIDVDRYNNINRNNQ---ITRNQNNWQHNAVHRDGVPYRDSKSREQYGRQLDGARQREAY 323
            +   R+++  R  +   ++     W+H   HR GV Y +   +E+             Y
Sbjct: 247 VVVDHRHSHHYRPRERYSVSYGAQPWKHKPEHRRGVVYHNPVVKER-------------Y 293

Query: 324 RGDNAQRAQAREKARGSMDKHGIERPATSNREARDSARKAQSATSPGNRMQAGTDRPKAS 383
            GDN  + + R+       +H   + + S RE +D+           NR     D+ +  
Sbjct: 294 YGDN--KFRGRDSHSTGSGQHFTSQYSKS-REHQDARY---------NRDNKNYDKRQDK 341

Query: 384 DRSQGTARSTRENQQPRKQTAQVNQRGQGDLQGRQTAQKRPA-ASTGSAGSARNNAFAGV 442
           DR      ++R+N   R++T    Q  Q +L+ R+ A      A+       RN+     
Sbjct: 342 DRGN---NASRDNHYSRERTPSY-QNTQAELKERRVAPTNSTQANKEGYKRERNDNARND 397

Query: 443 RSPSQANAQASRGQASQASARRPSASRPAGHQVSRPSSPPARQ 485
               Q  A+A+R QA ++  R+          V   + P  ++
Sbjct: 398 NQVRQMQAKATREQAKESPQRQYQTREQQPRSVETRTQPQRQE 440