Pairwise Alignments

Query, 807 a.a., UvrD/REP helicase family protein from Pseudomonas fluorescens FW300-N1B4

Subject, 735 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score = 70.9 bits (172), Expect = 2e-16
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 22/196 (11%)

Query: 492 RMFALFSEHSPENLKLLSDELLRPMSHLMIDEFQDVSPQIVSWIRASLAEIRSRGPAMHV 551
           R + L S + P  L+    E  R   H+++DEFQD +    +W++       S G     
Sbjct: 192 RTYELLSRNEP--LRRHYQERFR---HILVDEFQDTNRLQYAWLKLLAGHDGSAG----- 241

Query: 552 GRGAQRSSLLCVGDDWQSIYGWRGSSPTYFMEFNKEFPSPSTTKVMLSDNYRSHQHIIDA 611
               Q +++  VGDD QSIY +RG+      +F +EF   +   + L  NYRSH +I+DA
Sbjct: 242 --APQGAAVFAVGDDDQSIYAFRGAEVGNMRDFEREFGVQNV--IRLEQNYRSHGNILDA 297

Query: 612 AEHIVRAAPAIAGKKA---KASGEPKALLPVNILDRDDQ----GMAQRLIEHYRKGDSIL 664
           A  +++      GK     + +GEP  +      D D+       A+ LI      D I 
Sbjct: 298 ANALIKNNQGRLGKNLWTDQGAGEPIRVFE-GFSDLDEARWIVDEARELIREGISRDQIA 356

Query: 665 MLYRKSSDKSLIEEHI 680
            LYR ++   ++E  +
Sbjct: 357 FLYRSNAQSRVLEHEL 372



 Score = 36.6 bits (83), Expect = 5e-06
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 16/71 (22%)

Query: 700 LTYHSAKGLQADAVFLLGDCQHLTSSPYKNQVYRMAGLGKAGDSEAYDSAQKDEILRLAY 759
           +T H+AKGL+ D VF+ G  Q L   P++N V   +G              ++E  RL Y
Sbjct: 565 MTVHAAKGLEFDVVFISGLEQGL--FPHENSVMEKSG--------------EEEERRLMY 608

Query: 760 VGITRAVSHCY 770
           V ITRA    Y
Sbjct: 609 VAITRARQRLY 619



 Score = 35.8 bits (81), Expect = 9e-06
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 128 VIAGAGAGKSTTLVLRILLLSHYLGFELSSMTVVTFTRESRKDFINKLIELFAIWGRGIS 187
           ++AGAG+GK+  L  RI  L         ++  VTFT ++ K+ + +L  +  I  RG+ 
Sbjct: 25  ILAGAGSGKTRVLTTRIAWLISTGQMGPHAVLAVTFTNKAAKEMLARLSAMLPINTRGMW 84

Query: 188 LKD----ARDLVRTFHSRI-LP-MVRSLPGFERLQAFENLSHRVQGGDEE 231
           +         L+R  H    LP + + L   ++L A + L   +   DE+
Sbjct: 85  IGTFHGLCNRLLRAHHKEAGLPSLFQILDSADQLSAIKRLLKNLNVDDEK 134