Pairwise Alignments

Query, 489 a.a., Outer membrane protein assembly factor YaeT precursor from Pseudomonas fluorescens FW300-N1B4

Subject, 504 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  208 bits (529), Expect = 4e-58
 Identities = 140/452 (30%), Positives = 223/452 (49%), Gaps = 13/452 (2%)

Query: 5   GAGFSAPGEAWTKLWSSPALEQASQRSLNPDIRQWWQVFADPVLDALIAESDAHNSNLKI 64
           G  +  PG      W + + +            +WW +F D  LDAL  E+ A N +L  
Sbjct: 21  GPDYQRPGMDLPSAWRAESADAGMVAG-----EKWWTLFGDATLDALEEEALAANGDLAT 75

Query: 65  AGLRVMEARARLGIAQSGRYPQLQQASADSLYFNRKQSGGNNPQDSHFWQ--HSAGFDVG 122
           A   V  +RA+L +A S   P +      S+     + G N P +       H A     
Sbjct: 76  AMANVDASRAQLTVATSYLLPSIT-GQGSSVRQRGSERGQNPPVEGREVTDLHKASALAS 134

Query: 123 WELDFWGRFSRAIESSDASYFAAQANYEDVLVLLRAQVADTYFSLRTTEARLRVARENAE 182
           +ELD WG++ RA E++ A     +A Y  V + + +QVA +YF LR  + +L +AR+   
Sbjct: 135 FELDLWGKYRRAHEAARAGLLGTEAAYATVRLAVVSQVAQSYFGLRAADRQLDIARQTLT 194

Query: 183 QQKRNFEITEKLFNSGQSAELDVQQAKTQYLGTLSSIPDFEAQVVRTRNALAVLIGQPPS 242
            ++ + +I E  FNSG ++ELD +QA+ +     +S+   E  V     AL+ L+G+ P 
Sbjct: 195 SREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAAAETALSSLLGRSPR 254

Query: 243 ALPQLLEHEGL---IPLVDRAVLQDVPANLLLRRPDVRAAELNVAAQSALIGVAQTDFYP 299
            + +     GL      V   +   +PA LL RRPDV  AE ++   +A IGVA+ D  P
Sbjct: 255 DIVERSPERGLDIETFAVPPQIPAGLPAGLLARRPDVARAEADLHYATASIGVAKADLLP 314

Query: 300 SLTLLGSIVWTTDTLSG--TSNSLDLIGGPSLRWNLFDHGQISNNVRIQDARLQQLIEVY 357
           +++L G + + +  L+   +S+S     G S    L D G+   N+ + DA+ +  +  Y
Sbjct: 315 AISLTGLMGYESIDLTRLVSSSSGTWSYGASATMPLLDFGRTLANIDMADAKQRAALAAY 374

Query: 358 REKVRQAAREADDAASSLIKSLERERILGEAQVAAARSLSLANTQYREGYSDFQRVLDAQ 417
            + VR A RE  DA  +  K+ +          A  RSL+LA  +Y  GYS +  VLDA+
Sbjct: 375 EQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERSLTLARLRYENGYSSYLEVLDAE 434

Query: 418 RALLEQQDNYLLSRSNAVSNLIALYKALGGGW 449
           R+L + Q N + +R N +  ++ + K+LGGGW
Sbjct: 435 RSLFQAQLNLVEARRNQLDAVVQVCKSLGGGW 466