Pairwise Alignments

Query, 489 a.a., Outer membrane protein assembly factor YaeT precursor from Pseudomonas fluorescens FW300-N1B4

Subject, 541 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  320 bits (821), Expect = 6e-92
 Identities = 192/490 (39%), Positives = 269/490 (54%), Gaps = 19/490 (3%)

Query: 5   GAGFSAPGEAWTKLWSSPALEQASQRSLNPDIR-QWWQVFADPVLDALIAESDAHNSNLK 63
           G  FSAPG     +W   +   AS    + D+   WW  F DPVLD+L+ E+ + N +L 
Sbjct: 45  GPDFSAPGGDVPDVWQDASHPVASS---DADVDGTWWNTFNDPVLDSLVTEARSANLSLH 101

Query: 64  IAGLRVMEARARLGIAQSGRYPQLQQASADSLYFNRKQSGGNNPQDS------HFWQHSA 117
           +A LRV EARARLG A    YPQ QQ +    + +        PQ +       + Q SA
Sbjct: 102 LAALRVFEARARLGAAVGNLYPQTQQGTGGLTWTHPSDRAPTAPQPTTGRDNPDYVQTSA 161

Query: 118 GFDVGWELDFWGRFSRAIESSDASYFAAQANYEDVLVLLRAQVADTYFSLRTTEARLRVA 177
           G DV WELDFWG+F R IE++DA   A+ A+++  LV + A+VA +Y   RT + +L +A
Sbjct: 162 GLDVAWELDFWGKFRRGIEAADADLRASMADHQTALVSVSAEVARSYILYRTVQKQLAIA 221

Query: 178 RENAEQQKRNFEITEKLFNSGQSAELDVQQAKTQYLGTLSSIPDFEAQVVRTRNALAVLI 237
             N   Q+ +  I    FN G ++E D++QA +    T + IP+    +  TRNAL VL+
Sbjct: 222 ETNVAIQRESLRIATARFNYGATSERDMRQALSLLRDTEARIPNLAHSLRETRNALCVLL 281

Query: 238 GQPPSALPQLLEHEGLIPLVDRAVLQDVPANLLLRRPDVRAAELNVAAQSALIGVAQTDF 297
           G+ P  +   L  +  IP     V   +PA+LL RRPDV  A    A Q A +GVA+ DF
Sbjct: 282 GKAPQDISARLG-DAPIPTAPTHVAVGIPADLLRRRPDVHKALATAAGQCARLGVAKADF 340

Query: 298 YPSLTLLGSIVWTTDTLSGT------SNSLDLIGGPSLRWNLFDHGQISNNVRIQDARLQ 351
           YP+ TL G + +T   +         SN     GGP L   LF++G+I +NVR QDAR Q
Sbjct: 341 YPAFTLGGFVGFTASNVGAFGLGDTFSNGFTAYGGPGLSLPLFNYGRIVSNVRAQDARFQ 400

Query: 352 QLIEVYREKVRQAAREADDAASSLIKSLERERILGEAQVAAARSLSLANTQYREGYSDFQ 411
           Q +  YRE V  A RE +DA    I++  R  +L E+   AARS+ LA  QY+EG +DF 
Sbjct: 401 QSLTSYRETVLVALRETEDAIDRFIQAQGRTALLTESASDAARSMQLALIQYQEGSTDFT 460

Query: 412 RVLDAQRALLEQQDNYLLSRSNAVSNLIALYKALGGGWYS--AQPTVDQNTRQQMEQRTD 469
            VL A R L  ++D    ++     +L+A++KALGGGW+       +  N  ++M +RT 
Sbjct: 461 TVLTAARDLATREDALAAAKGEICQSLVAMFKALGGGWHKLPGDVFIPVNALREMRERTH 520

Query: 470 WGNLLNEPAP 479
           WG+LL E AP
Sbjct: 521 WGSLLEEDAP 530