Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 352 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  174 bits (442), Expect = 3e-48
 Identities = 117/356 (32%), Positives = 186/356 (52%), Gaps = 18/356 (5%)

Query: 28  IKWVLLLIVLSLAWYLLADRFTPYTQQARVGAFVIPVASEVAGRVIRVDVRNNQDVKAGD 87
           +K+  +  +L   ++L+AD   P T QA     +  VA +V+GRV+ V V NNQ V+ GD
Sbjct: 11  VKFASIGFILLFGYFLVADLKMPLTTQAMATRTITQVAPQVSGRVVSVQVANNQKVQQGD 70

Query: 88  VLFEVDQQPYQIAVDRARADLESTRRQIGASTAGIASAQANLRAAQANELKARQDNQRLE 147
           +LF +D  P+ +A ++A   LE  R+      A IA+A A + A +      +++ +R++
Sbjct: 71  LLFSLDATPFLLAQEQAELALEQARQDNAELDAAIAAATAEVNAKEIAYALKQREAKRIQ 130

Query: 148 GLYREDPGTISVRLLEVSRANREQAVSQVAAAHAEVQRAREQEGGSEEDNALLRSAATAL 207
            LY     ++S ++++ ++   + + SQ+ AA A++ + +   G   EDN  LR A   L
Sbjct: 131 SLYANQ--SVSQQMIDQAQTEVKASRSQLLAAKAQLAKVQTLRGLPGEDNLKLRQAKNRL 188

Query: 208 SKAELDLSNTQIRARSAGLITDLRTDVGQFATAGSPVMTLIAIHDVWISADMTENNLGLV 267
           S+A L LS TQIRA   G++T+++   G      +PVM L+ + +V + AD  E NL  +
Sbjct: 189 SQATLALSYTQIRAEHDGVVTNVQLASGNMVNQSTPVMALL-LDNVDVIADFREKNLRHI 247

Query: 268 EVGTPVSIVLDAMPGKVFEGRVRSVGYGVSVGQSTAPGSLPSVQNSRDWLRPAQRFPVII 327
             G    +  D  PG++F+  V SV  GVS  Q  A G L +   S  W+R AQRF + +
Sbjct: 248 APGATALVAFDGRPGELFQASVSSVDAGVSQAQFDANGRLATPTESNRWVRDAQRFRLHL 307

Query: 328 EFSEDSRKTLFASRAIRAGGQAEVMAFPTQDNPLNLLGRLF----VGLMSWLSYAY 379
           E + D   TL       AG +A V     Q  P N++  LF    +  +S L Y Y
Sbjct: 308 ELAPDVAITL------PAGAKATV-----QLQPSNVIYELFAKVQIKFISLLHYIY 352