Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 354 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (513), Expect = 2e-56
 Identities = 133/362 (36%), Positives = 210/362 (58%), Gaps = 17/362 (4%)

Query: 20  AADPAKKGIKWVLLLIVLSLAWYLLADRFTPYTQQARVGAFVIPVASEVAGRVIRVDVRN 79
           A   ++K   +++ LI++   + L ADR TP T  ARV A+++ VASEVAG +  V VR+
Sbjct: 4   AEQSSRKMSFYIIGLILVVWLYSLWADRVTPMTSDARVHAYLVRVASEVAGNITEVSVRD 63

Query: 80  NQDVKAGDVLFEVDQQPYQIAVDRARADLESTRRQIGASTAGIASAQANLRAAQANELKA 139
           NQ V+AG+ LF++D + Y++A+  A+A+L    + IGASTA +  AQA +  A A    A
Sbjct: 64  NQIVEAGEPLFQIDPRNYRLAMQSAQANLSLAGQNIGASTAAVEVAQAKVVDAIAARNNA 123

Query: 140 RQDNQRLEGLYREDPGTISVRLLEVSRANREQAVSQVAAAHAEVQRAREQEGGSEEDNAL 199
           ++   R+  L  +  G +S   L+ +   R++  + + AA A + +AR+  G + +DN  
Sbjct: 124 KEQAARVSELAGQ--GVLSQAELDNAIEARDRTQANLEAAEASLVQARQALGPAGQDNPQ 181

Query: 200 LRSAATALSKAELDLSNTQIRARSAGLITDLRTDVGQFATAGSPVMTLIAIHDVWISADM 259
           + +A   L KA+LDL  TQ++A S G++T+L+  +GQ A  GSP++T I    VWISA +
Sbjct: 182 ILAAMANLEKAQLDLQKTQVKAPSKGVVTNLQLTLGQRANVGSPMLTFIDPRGVWISALV 241

Query: 260 TENNLGLVEVGTPVSIVLDAMPGKVFEGRVRSVGYGV----SVGQSTAPGSLPSVQNSRD 315
            EN+L  ++VG  V IVLDA+PG+V EG+V S+G+G     ++ Q+T  G L +  N   
Sbjct: 242 RENSLEHIKVGNKVEIVLDALPGRVLEGKVDSIGWGTGGSNNIDQNT--GFLTADSNG-- 297

Query: 316 WLRPAQRFPVIIEFSEDSRKTLFASRAIRAGGQAEVMAFPTQDNPLNLLGRLFVGLMSWL 375
               AQR+PV I F+            IR G QA V  +  Q +    L  +++ ++S  
Sbjct: 298 --IKAQRYPVNIVFTGTK-----PPGNIRYGSQATVAFYTEQSSIGEFLAGIWMQIVSIW 350

Query: 376 SY 377
           +Y
Sbjct: 351 TY 352