Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 368 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (486), Expect = 2e-53
 Identities = 122/365 (33%), Positives = 206/365 (56%), Gaps = 7/365 (1%)

Query: 13  SPKASEPAADPAKKGIKWVLLLIVLSLAWYLLADRFTPYTQQARVGAFVIPVASEVAGRV 72
           S + S+     A+    ++  L+     + L ADR TP T QARV   +I ++ EV+G +
Sbjct: 9   SAEQSDKKISQARSFTYYIFALVAALWLYTLWADRMTPMTDQARVNGQLIRISPEVSGPI 68

Query: 73  IRVDVRNNQDVKAGDVLFEVDQQPYQIAVDRARADLESTRRQIGASTAGIASAQANLRAA 132
            +V + NN  VKAGD L  +D +P+++AV  A+ DL+   +   A +A I+ AQAN  AA
Sbjct: 69  SQVLITNNSIVKAGDELVTIDPRPFELAVKAAKFDLQQAAQSYEADSAAISVAQANEVAA 128

Query: 133 QANELKARQDNQRLEGLYREDPGTISVRLLEVSRANREQAVSQVAAAHAEVQRAREQEGG 192
           +     A+++ +R   L  +  GTIS  +++   A  E A + +A A + +++A+++ G 
Sbjct: 129 RVKVNNAKKNVERNRVLANK--GTISQAVMDNIIAELETAQAGLAQASSALEKAKQEFGP 186

Query: 193 SEEDNALLRSAATALSKAELDLSNTQIRARSAGLITDLRTDVGQFATAGSPVMTLIAIHD 252
              DN  ++S      +A L+L++T++ A + G+IT++   VG +A AG P++T I  ++
Sbjct: 187 RGIDNPEIQSVLNRQEQALLNLNHTKLTAPANGVITNMDVAVGDYAAAGQPLLTFINNNN 246

Query: 253 VWISADMTENNLGLVEVGTPVSIVLDAMPGKVFEGRVRSVGYGVSVGQSTAPGSLPSVQN 312
           +W++A + EN+L  ++ G  V IV DA PG+V+EG++ S+G+G S   S A  +   +  
Sbjct: 247 LWLTAMVRENSLAHLKPGDKVKIVFDATPGEVYEGKISSIGWGSSGNGSLAQDASNGLMT 306

Query: 313 SRDWLRPAQRFPVIIEFSEDSRKTLFASRAIRAGGQAEVMAFPTQDNPLNLLGRLFVGLM 372
           S      AQRFPV IEF+     +L A   +R GG+A V  +P +      L  L++   
Sbjct: 307 SPTSSSKAQRFPVNIEFT-----SLPADLNLRYGGRAVVGFYPDESYLGERLQDLWIWAW 361

Query: 373 SWLSY 377
           S++SY
Sbjct: 362 SYISY 366