Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 378 a.a., secretion protein, HlyD family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  119 bits (298), Expect = 1e-31
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 14/335 (4%)

Query: 50  PYTQQARVGAFVIPVASEVAGRVIRVDVRNNQDVKAGDVLFEVDQQPYQIAVDRARADLE 109
           PY++ AR     IP+   V G VI VDV+ N  +K GDVLF +D  PYQ  V   +A L 
Sbjct: 49  PYSRFAREYYVTIPITPAVKGLVISVDVKPNTFIKQGDVLFRIDPTPYQAVVKTKKAALL 108

Query: 110 STRRQIGASTAGIASAQANLRAAQANELKARQDNQRLEGLYREDPGTISVRLLEVSRANR 169
           +  +++    A   SA+AN+    A+  + +    R E  +R+         LE+    +
Sbjct: 109 AAEQEVPQLKAAWESAKANVARVAADRERNKSAYDRYEQGHRKGGANSPFTALELDNKRQ 168

Query: 170 EQAVS--QVAAAHAEVQRAR-EQEGGSEEDNALLRSAATALSKAELDLSNTQIRARSAGL 226
               S  Q+ A  AE  RAR   E   +  N+ +      L  A  +L  T +RA + G+
Sbjct: 169 LYLASDAQLTAVQAEELRARLAYESNVDGVNSKVAGLQGDLENALYNLEQTVVRAPADGI 228

Query: 227 ITDLRTDVGQFAT--AGSPVMTLIAIHDVWISADMTENNLGLVEVGTPVSIVLDAMPGKV 284
           +T +    G  A      PVM  I     + +    +N+L  ++ G    +VLDA+PGKV
Sbjct: 229 VTQMALRPGAMAVPLPLRPVMNFIPDEQRYFAGAFWQNSLLRLQEGDEAEVVLDAVPGKV 288

Query: 285 FEGRVRSVGYGVSVGQSTAPGSLPSVQNSRDWLRPAQRFPVIIEFSEDSRKTLFASRAIR 344
           F+G+V  V   ++ G+    G+L     S + L    R  V+I+  +D+ +     R   
Sbjct: 289 FKGKVAKVLPAMAEGEIQMNGTL----QSSNQLFQTGRVIVLIDIEDDAIR-----REFP 339

Query: 345 AGGQAEVMAFPTQDNPLNLLGRLFVGLMSWLSYAY 379
           AG   +V  +    + + ++ ++ + +  WL+Y +
Sbjct: 340 AGVAGQVAVYTEHFHHVAVMRKVLLRMQGWLNYLF 374