Pairwise Alignments

Query, 323 a.a., Site-specific recombinase, phage integrase family from Pseudomonas fluorescens FW300-N1B4

Subject, 297 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella loihica PV-4

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 21/287 (7%)

Query: 34  RLAPSSQLTMRYVLQDAADRLDFEDMNIEEIPWHQLQPEDVVALVATLREDGYAPNTSSL 93
           +L+P +    R+ L+   + L       E   W ++  E + A++  L   G  P + +L
Sbjct: 18  QLSPHTVRNYRFELERVGELLP------ENFIWAEVSDEQLQAVLNKLHRKGLGPRSIAL 71

Query: 94  YVNAVRGVMNEAWRMSLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIRDLMEVCAADPR 153
            ++A++   +   +   I ++  L + + K     +    +N+    +  L+ +   D  
Sbjct: 72  TLSALKQFCHYLLQEGYIKKDPCLNLSAPK----QQKPLPKNMDLDSVTHLLSIEGDDAL 127

Query: 154 PQGLRDAAIIGILYGSGMRKSESVNLDLAQVDFTERSLCVTAKGNKQLIKYAPAWAFAKL 213
              LRD AI+ + Y SG+R +E   LD   +   E  + V  KG+K+ I      A + +
Sbjct: 128 --ALRDKAIMELFYSSGLRLAELAALDTRDIASGEHQVKVMGKGSKERIVPIGRMALSAI 185

Query: 214 DAWLELRRSQLKEGETDDPFLFNRIRRGSHITRERITKHAIYYIARQRGAQVGVKIMPHD 273
           D WL++R   L   E D  F+  + +R +H    R  +  +    + +G  +  ++ PH 
Sbjct: 186 DDWLKVR--SLLPCEDDALFVTAKGKRLAH----RSIQARLNKWGQLQG--LNARVHPHK 237

Query: 274 FRRSFITRVIEEH-DLSIAQKLAHHSNIQTTANYDVRDDNERRRAVD 319
            R SF T ++E   DL   Q+L  H+N+ TT  Y   D     +  D
Sbjct: 238 LRHSFATHMLESSADLRAVQELLGHANLSTTQVYTSLDFQHLAKVYD 284