Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  359 bits (921), Expect = e-103
 Identities = 193/540 (35%), Positives = 315/540 (58%)

Query: 5   RSVSISRRLWLILIVAVVMLLTLGVLMLKQIHDDLYQAKAQKTQHVVQTASGILTYYHGL 64
           R   I+ RL  +L++A+V    + V  L  I + L + K  K   +      +++ ++  
Sbjct: 9   RKFKIAHRLLFMLLLAIVATGIMFVFALANIEEVLVKEKQAKLSALSDVGEKVISQFYEA 68

Query: 65  ETAGTLTRDAAQKQALTAVRGLRYDQNDYFWINDLTPVMVMHPTNPKLEGQNLSTIRDPD 124
             AG+++ + A++ A+ A+  LRY+ N+YFW  D   +MV H    KL G N+  ++DP+
Sbjct: 69  SQAGSMSEEEAKRNAIAALDALRYEGNEYFWTIDRQGIMVQHAFAKKLVGTNVLGMKDPN 128

Query: 125 GFALFNEMVAIAKAKGAGMVDYRWPKPGASAPVEKTSYVKLFEPWGWVIGSGVYIDDMQA 184
           G  LF +MV         +++Y W +P ASAP  K S VK F PWGW++G+G+Y+DD+Q 
Sbjct: 129 GVRLFEKMVTGTANSDYALIEYMWNRPNASAPSPKMSVVKRFTPWGWIVGTGIYVDDIQE 188

Query: 185 EFYAQVWKASFVGLVIALIMALLVIMIARSIVRPLQETVNAMANIASGESDLTRSLDTHG 244
           E  A ++K   + + + L + L++ +I+RSI  P+ +T+ A  NIA GE DLT  L+  G
Sbjct: 189 EMQAFIYKYLLICIAVWLPVILILGVISRSISAPMADTIAAFENIARGEGDLTLRLEESG 248

Query: 245 QDEVTQLARHFNAFTAKLRLVISQLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMELV 304
           +DE+ Q+A  FN F AK++ +++ +  S     + +  L + +AQA   +     + + V
Sbjct: 249 RDELKQVAASFNEFVAKIQALVNSVSASVTHSRELAEGLADISAQASMVTANMQAETQSV 308

Query: 305 ATAINEVTYGVQDVAKNAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEVI 364
           ATAINE++    +VA NA+ AA    +A+ +A      +DG++ +I  LS+ ++   +  
Sbjct: 309 ATAINEMSMASSEVASNAQLAADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTADEA 368

Query: 365 RTLAAESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQ 424
           + L   S +IG +L+VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ
Sbjct: 369 QALQISSGKIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQ 428

Query: 425 KSTAEIQSMIERLQSHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNA 484
           +ST EI ++IE +++  ++    +  +   S+ T+ +      +L  I  ++R ++ +N 
Sbjct: 429 ESTQEINAIIEAIRASVDSVNASVARAKAQSEQTVGETSQVVEALQTIKSSIRQISDMNI 488

Query: 485 SIASATLQQAHVVEDINQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFRV 544
            IA+AT +Q+ V+ ++N NVT+   +S      +E+    S  +K  S  L  L+  F++
Sbjct: 489 QIATATEEQSAVIAELNMNVTRINDISLENQQKSEEIGSTSEQIKSGSADLESLISTFKL 548