Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  280 bits (717), Expect = 8e-80
 Identities = 171/541 (31%), Positives = 283/541 (52%)

Query: 4   LRSVSISRRLWLILIVAVVMLLTLGVLMLKQIHDDLYQAKAQKTQHVVQTASGILTYYHG 63
           LR  +I +RL L+L++A +         + +  ++L + K  +    + T   ++  ++ 
Sbjct: 5   LRRFTILQRLILMLVLAAIGTFVFASFSINEQRNNLIKQKWLQNDAQLSTLLSVIDTHYR 64

Query: 64  LETAGTLTRDAAQKQALTAVRGLRYDQNDYFWINDLTPVMVMHPTNPKLEGQNLSTIRDP 123
                 LT + AQ++A   V  ++Y ++ YF + D    ++ +  +P   G   S +   
Sbjct: 65  QSQQNILTPEDAQREAANLVNQIQYGESGYFLLFDADHTLLANGASPDQLGIKASKLTSQ 124

Query: 124 DGFALFNEMVAIAKAKGAGMVDYRWPKPGASAPVEKTSYVKLFEPWGWVIGSGVYIDDMQ 183
            G    ++++  A A G          P      E     + F  W W + +  Y+ D+ 
Sbjct: 125 MGGNALDKLLDKAMASGIAKASMEMRNPITGEQEEALMEARTFPAWQWTLVTTSYMSDVN 184

Query: 184 AEFYAQVWKASFVGLVIALIMALLVIMIARSIVRPLQETVNAMANIASGESDLTRSLDTH 243
               + ++    + L+I++ +    +++  SI  PL + ++AM +IA GE DLT+ L T 
Sbjct: 185 DTTISVMYNYLGIMLLISVPIFAFFLILNHSISSPLNQAIDAMKDIAEGEGDLTKRLPTQ 244

Query: 244 GQDEVTQLARHFNAFTAKLRLVISQLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMEL 303
           G+DEV  LA  FN F  K+  +++ LQ     L Q ++ L N  A++        Q+   
Sbjct: 245 GKDEVVALAIAFNNFVGKINKMVADLQPVGHDLNQDADRLFNAVAESNASVDHLHQETSS 304

Query: 304 VATAINEVTYGVQDVAKNAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEV 363
           VATAIN++     ++A + + AA    + + QAQ  +  +DG+++   KL   +  A  +
Sbjct: 305 VATAINQMLSTTHEMASSTQQAADAANSVKQQAQDSKQQMDGTVENTHKLVQELKNAEGI 364

Query: 364 IRTLAAESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRT 423
            + L   S QIGS+L+VIR IA+QTNLLALNAAIEAARAG  GRGFAVVADEVR LA RT
Sbjct: 365 TQHLGVSSEQIGSILDVIRGIADQTNLLALNAAIEAARAGAHGRGFAVVADEVRALANRT 424

Query: 424 QKSTAEIQSMIERLQSHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLN 483
           Q ST EIQ +I  +Q+     +    D+   S    +QA   G SLN I + + +++ +N
Sbjct: 425 QDSTNEIQKIITDIQNGVANVMHSNSDTQTQSVELQQQAQAVGESLNTILELIAHISDMN 484

Query: 484 ASIASATLQQAHVVEDINQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFR 543
             +ASAT +Q+ V E+IN+N+     LS  +  A E + +A+  L+++S+    +L QF+
Sbjct: 485 TQLASATEEQSLVTEEINRNICSITELSEVSVKANESNRMAAESLRQISQTSAKILGQFK 544

Query: 544 V 544
           V
Sbjct: 545 V 545