Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  269 bits (688), Expect = 2e-76
 Identities = 174/517 (33%), Positives = 265/517 (51%), Gaps = 21/517 (4%)

Query: 39  LYQAKAQKTQHVVQTASGILTYYHGLETAGTLTRDAAQKQALTAVRGLRYDQNDYFWIND 98
           LY  +  + +  V  A  I+ +   L TAG + +         A+R +R+    YF+I D
Sbjct: 48  LYSERKAQLKDQVDIALDIVEHQLSLGTAGDVNK---------ALRNVRFGTAGYFFIYD 98

Query: 99  LTPVMVMHPTNPKLEGQNLSTIRDPDGFALFNEMVAIAKAKGAGMVDYRWPKPGASAPVE 158
                  H   P LEG     + DP+G  +   ++  A++ G G  +Y + KPG +  V 
Sbjct: 99  FDGFNRFHAVKPALEGTAQIGMTDPNGKKIVVGLIDAARS-GDGFFNYDYSKPGVTGLVP 157

Query: 159 KTSYVKLFEPWGWVIGSGVYIDDM--QAEFYAQVW------KASFV---GLVIALIMALL 207
           K  Y        W++G+G Y DD+  Q E Y +V       KA  +    LV+  I A++
Sbjct: 158 KIGYAATVPGKDWILGTGAYTDDIDAQVESYREVMTKHMNDKAMMILLFALVLVAITAVV 217

Query: 208 VIMIARSIVRPLQETVNAMANIASGESDLTRSLDTHGQDEVTQLARHFNAFTAKLRLVIS 267
           +++ A+ +V P+   V  + +IA GE DLT+ LD  G DE+  L R FN F  KL+ +I 
Sbjct: 218 MLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGIIK 277

Query: 268 QLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAAS 327
            +  +   +   ++ + +  A   Q+    + + + V TAI E++    +VA +    A 
Sbjct: 278 DVARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSATASEVAMSTTQVAE 337

Query: 328 EMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEVIRTLAAESTQIGSVLEVIRSIAEQ 387
             + A       Q  +D SL ++  L + ID A   I +L  +S +I SVL VI  IAEQ
Sbjct: 338 ATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQ 397

Query: 388 TNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQSHSEAAVKV 447
           TNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EI  M+  L +    AV  
Sbjct: 398 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSELHNLVSLAVSS 457

Query: 448 IGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNASIASATLQQAHVVEDINQNVTQA 507
           +  S ++   ++  +     SL A+  A+ ++N ++  IA+A  +Q+ V E+IN+NV   
Sbjct: 458 MESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVTEEINRNVFAI 517

Query: 508 AGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFRV 544
             + +    A+  +S  S  L      L+ L+ QF+V
Sbjct: 518 QEIVNELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554