Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  261 bits (666), Expect = 7e-74
 Identities = 151/354 (42%), Positives = 214/354 (60%)

Query: 191 WKASFVGLVIALIMALLVIMIARSIVRPLQETVNAMANIASGESDLTRSLDTHGQDEVTQ 250
           +K   +G +  LI   +   IA+SI RP+ ET NA+ +IA GE DLTR ++   +DE+ Q
Sbjct: 281 FKLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQ 340

Query: 251 LARHFNAFTAKLRLVISQLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMELVATAINE 310
           LA  FN F  K+   ++Q+  S   L  S+ E+     + QQ +++Q  + E VATA+NE
Sbjct: 341 LALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNE 400

Query: 311 VTYGVQDVAKNAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEVIRTLAAE 370
           +   VQ+VA NA  AA    +A    + G++ ++  +  I  L+  I  A + I  L   
Sbjct: 401 MAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERN 460

Query: 371 STQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEI 430
           + QI SVL VIR+IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST+EI
Sbjct: 461 TAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEI 520

Query: 431 QSMIERLQSHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNASIASAT 490
           Q MIE LQ  +++ V  +  S+  +Q  +     AG +L AI QA+  ++ +N  IASA 
Sbjct: 521 QQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAA 580

Query: 491 LQQAHVVEDINQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFRV 544
            +Q  V  +IN+NV     ++ +   +A Q++ A   L +LS +L  LL QFR+
Sbjct: 581 NEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634