Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  285 bits (729), Expect = 3e-81
 Identities = 166/541 (30%), Positives = 294/541 (54%)

Query: 4   LRSVSISRRLWLILIVAVVMLLTLGVLMLKQIHDDLYQAKAQKTQHVVQTASGILTYYHG 63
           LR  +I +RL ++L++A +  +      +K+ + +L + K  +    + +   ++  Y  
Sbjct: 5   LRQFTILKRLMMMLVMAAIGTVCFASFSIKEQYSNLIEQKWLQIDGQLGSILSVIDVYRQ 64

Query: 64  LETAGTLTRDAAQKQALTAVRGLRYDQNDYFWINDLTPVMVMHPTNPKLEGQNLSTIRDP 123
              +G +    AQK A + +   RY    YF + D    ++ H  +  + G +      P
Sbjct: 65  DAASGKMREQEAQKAAASLINQTRYAGVGYFILIDDNNQILAHGESASMIGTSAQNFTLP 124

Query: 124 DGFALFNEMVAIAKAKGAGMVDYRWPKPGASAPVEKTSYVKLFEPWGWVIGSGVYIDDMQ 183
           +G      +++ A+  G   ++Y    P +    +K +  + +  WGW + +G Y+ D++
Sbjct: 125 NGTNPLTTLLSQARQNGKSTLEYPIANPVSKIVEDKLAEARYYPQWGWTLITGAYLSDVK 184

Query: 184 AEFYAQVWKASFVGLVIALIMALLVIMIARSIVRPLQETVNAMANIASGESDLTRSLDTH 243
              Y  +     +  +I++ +    +++  SI  PL + + A+ +IA GE DL++ L T 
Sbjct: 185 ESLYEVMVDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIEALEDIAQGEGDLSQRLSTQ 244

Query: 244 GQDEVTQLARHFNAFTAKLRLVISQLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMEL 303
           G+DEV  LA  FN F  K+  ++  LQ    +L   +  L     ++ Q ++   ++   
Sbjct: 245 GKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKLLMLAVEESNQSAEHIHRETGS 304

Query: 304 VATAINEVTYGVQDVAKNAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEV 363
           VATA+N++     ++A N + AA    + +SQAQQ +  ID +++  +KL   +  +  +
Sbjct: 305 VATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGVIDNTVRDTEKLVQELKASEAI 364

Query: 364 IRTLAAESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRT 423
            + L   S QIGS+L+VIR+IAEQTNLLALNAAIEAARAG  GRGFAVVADEVR LA RT
Sbjct: 365 TQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRALANRT 424

Query: 424 QKSTAEIQSMIERLQSHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLN 483
           Q ST EIQ +I  +Q+   + ++    + R S+    +A  AG ++ AI + + +++ +N
Sbjct: 425 QDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEAGQAMAAILELIAHISDMN 484

Query: 484 ASIASATLQQAHVVEDINQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFR 543
             +ASAT +Q+ V E+IN+N+   + L+  +  A E +S A+  L+++S+ ++  L QF+
Sbjct: 485 TQLASATEEQSLVTEEINRNICNISELTEVSVKANESNSRAAQSLQDISQDMSHTLGQFK 544

Query: 544 V 544
           +
Sbjct: 545 I 545