Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 749 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  253 bits (647), Expect = 1e-71
 Identities = 170/524 (32%), Positives = 267/524 (50%), Gaps = 57/524 (10%)

Query: 76  QKQALTAVRGLRYDQNDYFWINDLTPVMVMHPTNPKLEGQNLSTIRDPDGFALFNEMVAI 135
           +++AL  +  +R    +YFW+NDL P MVMHP  P+L+G +LS   D +G  LF EM  +
Sbjct: 225 KQEALDQIARIRLSDGNYFWVNDLRPYMVMHPVRPELDGTDLSRTTDAEGKLLFVEMAKV 284

Query: 136 AKAKGAGMVDYRWPKPGASAPVEKTSYVKLFEPWGWVIGSGVYIDDMQAEFYAQ------ 189
           A+ KGAG V YR+ KPGA+    K SYVKLFEPWGWVIG GVY+DD+  E  A+      
Sbjct: 285 ARDKGAGTVAYRFGKPGAAGDFPKLSYVKLFEPWGWVIGKGVYMDDVDREIVAEQERFSQ 344

Query: 190 -----VWKASFVGLVIALIMALLVIM-IARSIVRPLQETVNAMANIASGESDLTRSLDTH 243
                + ++  +GL+IA  M  LV+  I   + +P+ + V     +ASGE D   S+   
Sbjct: 345 AIGGLMTRSGLIGLMIATTMVGLVLFYIHYRLRQPMNQLVRYAGQVASGELD--ASVSGR 402

Query: 244 GQDEVTQLARHFNAFTAKL--RLVISQLQ------------------------------- 270
            Q E+  LA    +  A L  R+  +QL+                               
Sbjct: 403 FQGELLLLADALRSMVASLGERMEEAQLKGRLAEEEAAHARAATAEADDARRKAEGAKAE 462

Query: 271 ---VSAG-------ALGQSSNELGNDAAQAQQRSQQQSQQMELVATAINEVTYGVQDVAK 320
               +AG       +L Q+S ++   + +    ++ Q Q++   ATA+ E+   + +VA 
Sbjct: 463 GMLAAAGILDTIVTSLTQASQKVAALSEEISDGAEGQRQRITETATAMEEMNATILEVAG 522

Query: 321 NAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEVIRTLAAESTQIGSVLEV 380
           N+  AA    +A  +A++G      S+  I+++    D     +  L  ++  IG ++ V
Sbjct: 523 NSSKAAENADHARGRAEEGASTASASVAAIEEVQRLADALKVNVAELGVKAEAIGRIINV 582

Query: 381 IRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQSH 440
           I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA++T  +T+E+   I  +Q  
Sbjct: 583 INDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATSEVGEAIRAIQQA 642

Query: 441 SEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNASIASATLQQAHVVEDI 500
           +      +  ++ A     E    +G +L+ I            SIA+A+ +Q+   E+I
Sbjct: 643 TRDNTHSVERAAAAVDKATELVVRSGKALSEIVVLSEQSADRVRSIATASEEQSAASEEI 702

Query: 501 NQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFRV 544
            + + +  GLS        Q++ A   + +   +LN L+++ ++
Sbjct: 703 TRALDEINGLSGRITEGIGQAAGAQRDMSQQCRKLNELIEKIKL 746



 Score =  129 bits (324), Expect = 4e-34
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 45/215 (20%)

Query: 16  ILIVAVVMLLTLGVLMLKQIHDDLYQA---KAQKTQH------------VVQTASGILTY 60
           ++I+ V+ L+  G + L  +  DL Q    +AQKT+             +V +AS I+  
Sbjct: 9   LIIIVVIGLVVEGGIFLGYVSFDLSQFAAFQAQKTRESIYTHEQYSLRDMVDSASSIVEK 68

Query: 61  YHG----LETAGTLTRDAAQ--------------------------KQALTAVRGLRYDQ 90
           Y+     +E    L RD  +                          ++ L ++RGLR+  
Sbjct: 69  YYAQSRDMEALKRLKRDELKLVVDAAASMVQAQVAAAPQERKAFVAREMLASLRGLRFAG 128

Query: 91  NDYFWINDLTPVMVMHPTNPKLEGQNLSTIRDPDGFALFNEMVAIAKAKGAGMVDYRWPK 150
           ++Y W+NDL  V++MHP +P++EG+    IRD  G A+F E V+IA++KG GMVDY WP+
Sbjct: 129 DNYLWVNDLDTVVLMHPVSPQMEGKPQRDIRDEQGKAIFTEFVSIARSKGEGMVDYMWPR 188

Query: 151 PGASAPVEKTSYVKLFEPWGWVIGSGVYIDDMQAE 185
           PG   P  K S+VKL    GWV+G+G Y+DDM A+
Sbjct: 189 PGQKQPQVKVSFVKLIPELGWVVGAGAYLDDMTAQ 223