Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  278 bits (712), Expect = 3e-79
 Identities = 180/562 (32%), Positives = 292/562 (51%), Gaps = 35/562 (6%)

Query: 8   SISRRLWLILIVAVVMLLTLGVLMLKQIH--------------DDLYQAKAQKTQHVVQT 53
           + S R  L+L+    ++LT  VLM    H              + L   +  + +   Q 
Sbjct: 3   NFSLRNKLLLLALFPLILTFIVLMTVSYHVEQSALADEVTTFREKLIGERKTQIKEATQI 62

Query: 54  ASGILTYYHGLETAGTLTRDAAQKQALTAVRGLRYDQNDYFWINDLTPVMVMHPTNPKLE 113
           A+GI+ Y   L+  G + +         A+R +R+  + YF++ D     + H   P LE
Sbjct: 63  AAGIVQYQLSLKEQGNVNQ---------ALRDIRFGSSGYFFLYDSQGKNLFHAVMPNLE 113

Query: 114 GQNLSTIRDPDGFALFNEMVAIAKAKGAGMVDYRWPKPGASAPVEKTSYVKLFEPWGWVI 173
           GQN   + DP G  +   ++  AK  G G   + + KP  +  +EK  Y  +     W++
Sbjct: 114 GQNKIDMTDPRGTKIIVGLLNAAK-NGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWML 172

Query: 174 GSGVYIDDMQA--EFYA-----QVWKASFVGLVIALIMALL----VIMIARSIVRPLQET 222
           G+G YIDD+ A  E Y      Q+   S+  L+IAL++A +    +++ A+ +V P++  
Sbjct: 173 GTGAYIDDIDAVVEDYRTTVTEQMIDKSYAILLIALLLAAITAPVILVTAQRMVTPIKNM 232

Query: 223 VNAMANIASGESDLTRSLDTHGQDEVTQLARHFNAFTAKLRLVISQLQVSAGALGQSSNE 282
            + + +IA GE DLT+ L   G DE+ QL R FN F  KL+ +I  +  +   +  ++N 
Sbjct: 233 ADNLNDIAKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANA 292

Query: 283 LGNDAAQAQQRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRNAESQAQQGQVN 342
           + +      ++    + + + V TAI E++    +VA+N    A     A       Q  
Sbjct: 293 IHDQTKVMSRQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRC 352

Query: 343 IDGSLQQIDKLSSTIDQAVEVIRTLAAESTQIGSVLEVIRSIAEQTNLLALNAAIEAARA 402
           +D SL++I  L + I+ A   I++L+ +S +I SVL VI  IAEQTNLLALNAAIEAARA
Sbjct: 353 VDASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARA 412

Query: 403 GEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQSHSEAAVKVIGDSSRASQLTIEQA 462
           GEQGRGFAVVADEVR LA RTQ ST EI  M+  L      AVK + +S ++   +++ +
Sbjct: 413 GEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSS 472

Query: 463 GLAGASLNAIGQALRNLNGLNASIASATLQQAHVVEDINQNVTQAAGLSHSTALAAEQSS 522
                SL ++  A+  +N ++  IA+A  +Q+ V E+IN+NV     + +    ++E+++
Sbjct: 473 RAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAA 532

Query: 523 VASVHLKELSEQLNGLLKQFRV 544
             S  + +    L  L+ QF++
Sbjct: 533 SVSQTVSQEGLNLGKLVGQFKI 554