Pairwise Alignments

Query, 278 a.a., Outer membrane lipoprotein-sorting protein from Pseudomonas fluorescens FW300-N1B4

Subject, 270 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 40/270 (14%)

Query: 7   SLTVGVLMLTSASVFAAQGQSADEIIRQARDRNDGKSFMSQVSLVL--------LDKQGN 58
           S T   L   +A + ++    A EI+R+A ++  GKS     ++ +        +  +  
Sbjct: 23  SATAETLATETAVINSSDALEAREIVRRADEQMRGKSSYVVATMNIVRPAWTRSMSMKSW 82

Query: 59  SRVREFSYLQKDYPDSDKFTMYFSAPNDVRDVAFHIENPHEALGAEDSQWMYLPVSRQTR 118
           ++ +E S +    P  DK ++                    +L      W ++P   +  
Sbjct: 83  TKGQELSLVLVTAPAKDKGSV--------------------SLKRYREMWNWVPAIERII 122

Query: 119 RISTTDKRGAFMGSDYSYADL--DKIRANDYRQTLVAEENIAGRDCYVIERAPASAQVLA 176
           +I+ +    ++MGSD++  DL        DYR  LV  E+I G DC+VI+   A A+  A
Sbjct: 123 KIAPSMLSQSWMGSDFTNDDLINQSSIVVDYRHQLVQHESIEGDDCFVID---AFAKPDA 179

Query: 177 KTGYNMLKVWIDKKNLLVMRQDFFDVKGVMFKQMRTLKVETVDQIDSITLSETEDFI--- 233
              ++ +++WI  ++ L  + +FFD      +Q+ TL    + ++    L+     I   
Sbjct: 180 PVVWSRIRLWISSRHYLQRKVEFFD---EFDEQVNTLTTSGIQEMGGRMLATKMVMIPAD 236

Query: 234 -AGTRSQLRFNQLQYNVELDDRLFIQTAIK 262
             G R++L  ++  ++ E+ D  F Q  +K
Sbjct: 237 KPGQRTELITHEAAFDFEIGDDFFSQQQMK 266