Pairwise Alignments

Query, 406 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) from Pseudomonas fluorescens FW300-N1B4

Subject, 413 a.a., beta-ketoacyl synthase (RefSeq) from Shewanella loihica PV-4

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 101/407 (24%), Positives = 159/407 (39%), Gaps = 57/407 (14%)

Query: 5   SHTQVAIAGAGCVLPSGLGVESFWSAVCESRSGIAPLHSRQFHSERVTAF-GKILDEDHE 63
           S  +V + G G V P G  VE+ W A+   +SGIAP+ ++   SE  T F G + D D E
Sbjct: 2   SKRRVVVTGIGLVTPVGNTVEASWKALLAGQSGIAPI-TKFDASEFSTRFSGSVKDFDVE 60

Query: 64  RSRQDLAQNLQRYCSPAVIWGVSAVRQALAEANL-APGQDGLRYGLYCCQGGFTHPSL-A 121
              Q L +   R     + +G++A  QA+ +A L    +D  R G     G    P + A
Sbjct: 61  ---QYLPKKEARKMDLFIQYGMAAGIQAIQDAGLNMEVEDPTRVGTAIGAGMGGMPLIEA 117

Query: 122 SYGELLHECRGGEGADMRLLARRILQERVQDPFLVLKGLSNILLGVVSLALKLECECNAY 181
           ++  LL   +GG               R   PF V   + N++ G +S+   +     A 
Sbjct: 118 AHSALL---KGG--------------PRKISPFFVPSTIINMIAGHLSIKYGMTGPNFAV 160

Query: 182 MQGVSGNLAALREASAALQSRRIDAAIIVGSGSELDALALGALVQAGVI---NADGSQTL 238
               +  +  +  A+  +     D  I  G+      LA+G    A  +   N D     
Sbjct: 161 TTACTTGVHNIGFAARTIAYGDADVMIAGGAEDVTCPLAVGGFGSAKALSTRNEDPVAAS 220

Query: 239 RPFDVQGTGGIAGEGAAALILRRREDLGDAPQTC---LLGMTAHVDLDALSLP------- 288
           RP+D    G + G+GA  +++   E       T    L+G     D   ++ P       
Sbjct: 221 RPWDKDRDGFVIGDGAGIMVMEEYEHAKARGATIYGELVGFGMSGDAFHMTSPPADGAGA 280

Query: 289 -------------DKQ-VDLLVCAGSGDPRKDRQLSQTLARAGAAH-----ITSGLPVTG 329
                        DKQ V  +   G+  P  D+  +  +      H     ++S   +TG
Sbjct: 281 ALAMENAIKDAAIDKQLVGYINAHGTSTPAGDKAEASAVKSVFGDHAYNLLVSSTKSMTG 340

Query: 330 ILSAAPSLVDLILARGALQAQSVPPILGLQRP-VAAHLPFVMDASRS 375
            L  A   V+ I+   AL+ Q +PP + L  P     L FV   +RS
Sbjct: 341 HLLGAAGAVEAIITLLALRDQMIPPTINLDNPDEGCDLDFVPHTARS 387