Pairwise Alignments

Query, 297 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N1B4

Subject, 185 a.a., RNA polymerase sigma factor (sigma-70 family) from Paraburkholderia graminis OAS925

 Score = 52.8 bits (125), Expect = 6e-12
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 13/154 (8%)

Query: 11  FEQRRPFLLGLAYRILGSRTEAEDVVQELFIKWLE-ADRASIATPAAWLTTACTRHCIDL 69
           F +   +L    +R++GS ++AED+    F +     D ++I  P A LTT   R   + 
Sbjct: 34  FRRSYGWLTSCMHRLVGSSSDAEDLAASAFTELAGYPDVSAIRQPRALLTTIARRLTFEH 93

Query: 70  LRSAHTSRVDYVGTWL-PEPIHTTHQHSPEHMHELASSLSTAFLLL---LERLTPKERAA 125
            R     R       L PEP+    + + E + ++        LL+   L+RL+ + R A
Sbjct: 94  WRRRDIERAYLARLALAPEPVAPAPEVALEAVQDI--------LLIDAALQRLSARAREA 145

Query: 126 YLLYEIFDMDYAQVAEAIGVQEAACRKLVSRAKA 159
           ++L +  DM YA +A  +GV  +  RK V++A A
Sbjct: 146 FILSQYEDMKYADIAARLGVSVSMVRKYVAQALA 179