Pairwise Alignments

Query, 308 a.a., transcription regulator protein from Pseudomonas fluorescens FW300-N1B4

Subject, 309 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (410), Expect = 9e-45
 Identities = 104/294 (35%), Positives = 152/294 (51%), Gaps = 18/294 (6%)

Query: 5   LPPLNAVRAFAVAARHQSFRLAAEELHVSHSAVSRHIKLLEEYLGVLLFERRIRQSVLTP 64
           LPPLNA+RAF  AARH SF  A  EL V+H A+S+ IK LE YL V LF R+ +Q  LTP
Sbjct: 8   LPPLNALRAFESAARHLSFTRAGNELFVTHGAISKQIKTLESYLDVSLFNRQHKQLSLTP 67

Query: 65  AGQRFYEQVSAGLSQIANAAAALKQHASL-PTVKINVRPSFAVLWLTPRLADFVAQHPGI 123
            G+R+   +S+ L  I+ A   L+    +   + INV PS  + WL PRL +F A+HP +
Sbjct: 68  EGERYLRHISSALQSISQATEELRSQPGIAQALSINVLPSLTINWLIPRLEEFKARHPHL 127

Query: 124 KPQVITQTQAPDQARDGFDVVIRRG--RDDWAPAIEARPLFEDELLLVAAPSLIERLPLE 181
              +       D  RD +DV IR    R      ++   L +++L LV AP L ++  ++
Sbjct: 128 YVDLSIGDFQVDFKRDKYDVAIRSATVRPTHCHVLK---LMDEDLCLVCAPQLAKQ--ID 182

Query: 182 DLTSLSRHTLLTVKARREDWHNWAMHFGQSQSATQVTRQFDHMHLALQAAVDGQGIALCP 241
            L  ++R TLL    R E W  WA   G  +  T      +H ++  QAAV G G+AL P
Sbjct: 183 SLQDINRQTLLKHTTRPELWPLWAEKVG-LKLTTDKMLGMEHFYMLSQAAVSGMGLALIP 241

Query: 242 TSLLGTHLSSGRLICPLPELRLPLPRYYYGVAPDV--------TAQTRVFVEWM 287
              +   L+   L+ PL   +   P  YY + P++          + + F++W+
Sbjct: 242 RFFIEKELAEDSLVIPL-ATQFTSPYAYYVLTPNLPPSKQSERPLKVQAFIDWL 294